RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 CETN1Q12798 172 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 IKQ13123 557 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CALCOCO2Q13137 446 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 MAPK7Q13164 816 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 XRCC4Q13426 336 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 KIF22Q14807 665 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 DRAP1Q14919 205 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 NFIXQ14938 502 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PPP2R5AQ15172 486 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PWP2Q15269 919 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 AMHR2Q16671 573 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 QPCTQ16769 361 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 KIAA1755Q5JYT7 1200 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ERMARDQ5T6L9 678 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 WLSQ5T9L3 541 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 SLFN13Q68D06 897 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 DUPD1Q68J44 220 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CC2D2BQ6DHV5 1058 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 DPY19L2P1Q6NXN4 242 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 GJB7Q6PEY0 223 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP17L6PQ6QN14 398 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 BTNL9Q6UXG8 535 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 KCTD1Q719H9 257 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 FBXO11Q86XK2 927 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CATSPER3Q86XQ3 398 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CEP57Q86XR8 500 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 GLYCTKQ8IVS8 523 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 TEX2Q8IWB9 1127 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 FUKQ8N0W3 1084 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 MYCT1Q8N699 235 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 GBP7Q8N8V2 638 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 SLC30A5Q8TAD4 765 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 LNX1Q8TBB1 728 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 SLC35G2Q8TBE7 412 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ETNPPLQ8TBG4 499 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CCHCR1Q8TD31 782 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 MORC4Q8TE76 937 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 DYDC1Q8WWB3 177 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 N4BP2L2Q92802 583 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 GJA10Q969M2 543 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 IFT74Q96LB3 600 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 EIF2AK1Q9BQI3 630 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ZSWIM1Q9BR11 485 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ERP44Q9BS26 406 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 TMEM109Q9BVC6 243 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PLVAPQ9BX97 442 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 AMNQ9BXJ7 453 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CELF4Q9BZC1 486 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 COA1Q9GZY4 146 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PABPC3Q9H361 631 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC134Q9H6E4 229 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PARVGQ9HBI0 331 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 VEZTQ9HBM0 779 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 TUFT1Q9NNX1 390 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 OLFML3Q9NRN5 406 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 HOMER3Q9NSC5 361 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ZDHHC18Q9NUE0 388 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 INTS9Q9NV88 658 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 USP40Q9NVE5 1235 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 DONSONQ9NYP3 566 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 NYAP2Q9P242 653 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CTTNBP2NLQ9P2B4 639 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 APEX2Q9UBZ4 518 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CNOT8Q9UFF9 292 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CNOT7Q9UIV1 285 aaKnown RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 CCNL1Q9UK58 526 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 DNAJC12Q9UKB3 198 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 AJAP1Q9UKB5 411 aaPredicted RBP3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PNMA2Q9UL42 364 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ODF2LQ9ULJ1 636 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 TRPC6Q9Y210 931 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 PCDHB13Q9Y5F0 798 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 LAMB1P07942 1786 aa3.8□□□□□ -1.8
COL8A1-204ENST00000462604 ZMYM2Q9UBW7 1377 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PHLPP1O60346 1717 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 FRMPD4Q14CM0 1322 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 IGSF9BQ9UPX0 1349 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TNRC6CQ9HCJ0 1690 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ROBO1Q9Y6N7 1651 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ARHGEF35A5YM69 484 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TMEM110-MUSTN1A8MSY1 372 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 DCDC2CA8MYV0 355 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 RSPH10B2B2RC85 870 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 C6orf229H3BNL8 230 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 DNM1LO00429 736 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 RASGRF2O14827 1237 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 BACH1O14867 736 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 KIAA0391O15091 583 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CLIC2O15247 247 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 MSH4O15457 936 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 P4HA2O15460 535 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TGFB1I1O43294 461 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SPOPO43791 374 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 EXOC3O60645 756 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SUN1O94901 812 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ATP6V1G2O95670 118 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ECEL1O95672 775 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SHBGP04278 402 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 RSPH10BP0C881 870 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms