RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 RAB34Q9BZG1 259 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 IFT122Q9HBG6 1241 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 XPNPEP1Q9NQW7 623 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 LRWD1Q9UFC0 647 aa21.04■□□□□ 0.96
SLC6A1-204ENST00000462473 COL6A3P12111 3177 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 C5orf67F2Z3F1 127 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 LAD1O00515 517 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 LINC00271P0C7V0 271 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 RPA1P27694 616 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 CUL4AQ13619 759 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 PDIA5Q14554 519 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 MXD4Q14582 209 aaPredicted RBP21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 SRGAP1Q7Z6B7 1085 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 RNF149Q8NC42 400 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 C11orf84Q9BUA3 381 aaPredicted RBP21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 THEGQ9P2T0 379 aa21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 PIN4Q9Y237 131 aaKnown RBP21.03■□□□□ 0.96
SLC6A1-204ENST00000462473 HOXA2O43364 376 aa21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 USO1O60763 962 aaKnown RBP21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 FGFR1P11362 822 aa21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 CCT6AP40227 531 aaKnown RBP21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 SPOUT1Q5T280 376 aaKnown RBP21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 TWF2Q6IBS0 349 aaKnown RBP21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 POTEGQ6S5H5 508 aa21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 ECHDC2Q86YB7 292 aa21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 RNF169Q8NCN4 708 aa21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 MRPL38Q96DV4 380 aaKnown RBP21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 PLVAPQ9BX97 442 aa21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 DBR1Q9UK59 544 aaKnown RBP21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 STK24Q9Y6E0 443 aa21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 PRRC2BQ5JSZ5 2229 aaKnown RBP21.02■□□□□ 0.96
SLC6A1-204ENST00000462473 A0A0U1RQF3 1178 aa21.01■□□□□ 0.95
SLC6A1-204ENST00000462473 MUTP22033 750 aa21.01■□□□□ 0.95
SLC6A1-204ENST00000462473 TFDP1Q14186 410 aa21.01■□□□□ 0.95
SLC6A1-204ENST00000462473 DTHD1Q6ZMT9 781 aa21.01■□□□□ 0.95
SLC6A1-204ENST00000462473 COL4A4P53420 1690 aaPredicted RBP21.01■□□□□ 0.95
SLC6A1-204ENST00000462473 EOMESO95936 686 aa21■□□□□ 0.95
SLC6A1-204ENST00000462473 PRPHP41219 470 aa21■□□□□ 0.95
SLC6A1-204ENST00000462473 PHKA2P46019 1235 aa21■□□□□ 0.95
SLC6A1-204ENST00000462473 MAEAQ7L5Y9 396 aa21■□□□□ 0.95
SLC6A1-204ENST00000462473 ABI1Q8IZP0 508 aa21■□□□□ 0.95
SLC6A1-204ENST00000462473 IGSF22Q8N9C0 903 aa21■□□□□ 0.95
SLC6A1-204ENST00000462473 ATXN2LQ8WWM7 1075 aaKnown RBP21■□□□□ 0.95
SLC6A1-204ENST00000462473 TMEM117Q9H0C3 514 aa21■□□□□ 0.95
SLC6A1-204ENST00000462473 CHD9Q3L8U1 2897 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 PDCP20941 246 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 ARL2P36404 184 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 PTENP60484 403 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 NAALADL2Q58DX5 795 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 ASAP3Q8TDY4 903 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 SNX29Q8TEQ0 813 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 P2RX5Q93086 422 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 POLR3FQ9H1D9 316 aaPredicted RBP20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 MINDY3Q9H8M7 445 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 AAASQ9NRG9 546 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 TYW1Q9NV66 732 aaKnown RBP20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 KIAA1024Q9UPX6 916 aa20.99■□□□□ 0.95
SLC6A1-204ENST00000462473 VPS37CA5D8V6 355 aaPredicted RBP20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 ARHGEF35A5YM69 484 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 GRM6O15303 877 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 SKIP12755 728 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 MRPS5P82675 430 aaKnown RBP20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 ATP2C1P98194 919 aaPredicted RBP20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 POU5F1BQ06416 359 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 ECM1Q16610 540 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 TIGD5Q53EQ6 642 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 KRT79Q5XKE5 535 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 PADI6Q6TGC4 694 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 ZNF598Q86UK7 904 aaKnown RBP20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 MCPH1Q8NEM0 835 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 CASD1Q96PB1 797 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 TRAIPQ9BWF2 469 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 LMAN2LQ9H0V9 348 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 ALG13Q9NP73 1137 aaKnown RBP20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 AGPAT5Q9NUQ2 364 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 COG5Q9UP83 839 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 PLAGL2Q9UPG8 496 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 PCDHB12Q9Y5F1 795 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 NLRC5Q86WI3 1866 aa20.98■□□□□ 0.95
SLC6A1-204ENST00000462473 RALGAPA2Q2PPJ7 1873 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 INO80B-WBP1J3KQ70 363 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 K7ELQ4 463 aaPredicted RBP20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 DLL1O00548 723 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 ERLIN2O94905 339 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 GLRA2P23416 452 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 RAB27AP51159 221 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 CAPSQ13938 189 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 IL17AQ16552 155 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 BRAPQ7Z569 592 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 KLHL23Q8NBE8 558 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 HLA-CQ95604 372 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 INTS4Q96HW7 963 aaKnown RBP20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 GPRC5CQ9NQ84 441 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 FAM105AQ9NUU6 356 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 DDX19AQ9NUU7 478 aaKnown RBP20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 RNF19AQ9NV58 838 aa20.97■□□□□ 0.95
SLC6A1-204ENST00000462473 ITGB1P05556 798 aa20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 ATF7P17544 494 aaPredicted RBP20.96■□□□□ 0.95
SLC6A1-204ENST00000462473 CDC25AP30304 524 aa20.96■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms