RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 MYH9P35579 1960 aaKnown RBP10.27□□□□□ -0.77
BRCA1-207ENST00000461798 TBKBP1A7MCY6 615 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 LARGE1O95461 756 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 KRT2P35908 639 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 PSEN1P49768 467 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 SPIRE1Q08AE8 756 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 NR5A1Q13285 461 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 ADAM15Q13444 863 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 ZNF598Q86UK7 904 aaKnown RBP10.27□□□□□ -0.77
BRCA1-207ENST00000461798 ECHDC2Q86YB7 292 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 C4orf19Q8IY42 314 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 POF1BQ8WVV4 589 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 RSPH1Q8WYR4 309 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 PPP2R3CQ969Q6 453 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 CASD1Q96PB1 797 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 C1QTNF1Q9BXJ1 281 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 INO80BQ9C086 356 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-207ENST00000461798 CWH43Q9H720 699 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 BRMS1Q9HCU9 246 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 CD320Q9NPF0 282 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 CYP26B1Q9NR63 512 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 TYW1Q9NV66 732 aaKnown RBP10.27□□□□□ -0.77
BRCA1-207ENST00000461798 DACT1Q9NYF0 836 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 SUCLA2Q9P2R7 463 aaPredicted RBP10.27□□□□□ -0.77
BRCA1-207ENST00000461798 FAM50BQ9Y247 325 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 LZTS1Q9Y250 596 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 PCDHB12Q9Y5F1 795 aa10.27□□□□□ -0.77
BRCA1-207ENST00000461798 EVPLQ92817 2033 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 MUC3AQ02505 3323 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 A0A087WZ62 844 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 TMEM150BA6NC51 233 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 H3BQ06 376 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-207ENST00000461798 DTNBO60941 627 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 LYPLA2O95372 231 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 BAG4O95429 457 aaKnown RBP10.26□□□□□ -0.77
BRCA1-207ENST00000461798 FGFR1P11362 822 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 IL9P15248 144 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 IRS1P35568 1242 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 PLCB3Q01970 1234 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 PDE12Q6L8Q7 609 aaKnown RBP10.26□□□□□ -0.77
BRCA1-207ENST00000461798 LRRC55Q6ZSA7 311 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 GJD3Q8N144 294 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 EFHBQ8N7U6 833 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 COLGALT1Q8NBJ5 622 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 NLRP7Q8WX94 980 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 HSD17B14Q9BPX1 270 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 FDXACB1Q9BRP7 624 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-207ENST00000461798 DHX33Q9H6R0 707 aaKnown RBP10.26□□□□□ -0.77
BRCA1-207ENST00000461798 ZSWIM4Q9H7M6 989 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 CLDND1Q9NY35 253 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 WRAP73Q9P2S5 460 aaPredicted RBP10.26□□□□□ -0.77
BRCA1-207ENST00000461798 PRKAG3Q9UGI9 489 aa10.26□□□□□ -0.77
BRCA1-207ENST00000461798 TCF20Q9UGU0 1960 aaKnown RBP10.26□□□□□ -0.77
BRCA1-207ENST00000461798 XIRP2A4UGR9 3374 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 BTBD18B2RXH4 712 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 PI4K2BG5E9Z4 385 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 FSCN2O14926 492 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 GAS2O43903 313 aaKnown RBP10.25□□□□□ -0.77
BRCA1-207ENST00000461798 MARCH6O60337 910 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 JAK2O60674 1132 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 ZNF623O75123 536 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 FGF18O76093 207 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 SLITRK3O94933 977 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 LAG3P18627 525 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 SFPQP23246 707 aaKnown RBP eCLIP10.25□□□□□ -0.77
BRCA1-207ENST00000461798 YWHABP31946 246 aaKnown RBP10.25□□□□□ -0.77
BRCA1-207ENST00000461798 RFC5P40937 340 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 NPEPPSP55786 919 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 DLX2Q07687 328 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-207ENST00000461798 ST3GAL1Q11201 340 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 CLLU1OSQ5K130 101 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 OTUD6AQ7L8S5 288 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 RHPN2Q8IUC4 686 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 DIS3L2Q8IYB7 885 aaKnown RBP10.25□□□□□ -0.77
BRCA1-207ENST00000461798 SLC7A3Q8WY07 619 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 ZNF668Q96K58 619 aaPredicted RBP10.25□□□□□ -0.77
BRCA1-207ENST00000461798 MSLNLQ96KJ4 702 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 SCLT1Q96NL6 688 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 MTMR9Q96QG7 549 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 SH2D3AQ9BRG2 576 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 LLPHQ9BRT6 129 aaKnown RBP10.25□□□□□ -0.77
BRCA1-207ENST00000461798 LXNQ9BS40 222 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 EPHX3Q9H6B9 360 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 IFT122Q9HBG6 1241 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 RGL1Q9NZL6 768 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 PCDHA12Q9UN75 941 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 LIMCH1Q9UPQ0 1083 aa10.25□□□□□ -0.77
BRCA1-207ENST00000461798 NLRC5Q86WI3 1866 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 FSD2A1L4K1 749 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 ASAP2O43150 1006 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 CSDE1O75534 798 aaKnown RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 EYA4O95677 639 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 CENPBP07199 599 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 SKIP12755 728 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 XRCC6P12956 609 aaKnown RBP eCLIP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 ATF7P17544 494 aaPredicted RBP10.24□□□□□ -0.77
BRCA1-207ENST00000461798 FGFR4P22455 802 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 GTF2F1P35269 517 aaKnown RBP eCLIP10.24□□□□□ -0.774e-8■■■□□ 16.5
BRCA1-207ENST00000461798 PHKA2P46019 1235 aa10.24□□□□□ -0.77
BRCA1-207ENST00000461798 ERVFC1P60507 584 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms