RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 TRIM59Q8IWR1 403 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 CCDC155Q8N6L0 562 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 RDH13Q8NBN7 331 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 DEPTORQ8TB45 409 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 BRI3BPQ8WY22 251 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 GLG1Q92896 1179 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 PRIMPOLQ96LW4 560 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 SPATA33Q96N06 139 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 CRACR2AQ9BSW2 395 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 PORCNQ9H237 461 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 NMRK2Q9NPI5 230 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 NLRC4Q9NPP4 1024 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 LZTFL1Q9NQ48 299 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 CYP26B1Q9NR63 512 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 AGPAT3Q9NRZ7 376 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 KCND1Q9NSA2 647 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 AGPAT5Q9NUQ2 364 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 DNAI1Q9UI46 699 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 SLC45A1Q9Y2W3 748 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 IGSF9BQ9UPX0 1349 aa7.44□□□□□ -1.22
MSH2-204ENST00000461394 DENND3A2RUS2 1198 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 LRRIQ4A6NIV6 560 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 H0YCG3 227 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 RNF225M0QZC1 329 aaPredicted RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 KIF3CO14782 793 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 NKRFO15226 690 aaKnown RBP eCLIP7.43□□□□□ -1.22
MSH2-204ENST00000461394 TGFB1I1O43294 461 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 KIF5CO60282 957 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 ZNF862O60290 1169 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 AKAP3O75969 853 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 FARP2O94887 1054 aaPredicted RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 CLSTN1O94985 981 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 ZBTB48P10074 688 aaPredicted RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 TXNP10599 105 aaKnown RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 TGFB3P10600 412 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 EDNRBP24530 442 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 MARK3P27448 753 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 TCF7P36402 384 aaPredicted RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 CASP4P49662 377 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 STAT5BP51692 787 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 ZNF157P51786 506 aaPredicted RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 NCKAP1LP55160 1127 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 MARSP56192 900 aaKnown RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 SOX10P56693 466 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 POLR2FP61218 127 aaKnown RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 GNG11P61952 73 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 KRT83P78385 493 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 STRN3Q13033 797 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 SPA17Q15506 151 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 ENOX2Q16206 610 aaKnown RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 ASIC2Q16515 512 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 TMEM259Q4ZIN3 620 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 FIGNQ5HY92 759 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 SFMBT2Q5VUG0 894 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 GBP6Q6ZN66 633 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 NYAP1Q6ZVC0 841 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 ARMCX2Q7L311 632 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 REXO1L1PQ8IX06 675 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 ZC3H3Q8IXZ2 948 aaKnown RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 DAW1Q8N136 415 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 ACRBPQ8NEB7 543 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 SLC7A3Q8WY07 619 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 SEPT1Q8WYJ6 367 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 HVCN1Q96D96 273 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 FAM167AQ96KS9 214 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 CCDC42Q96M95 316 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 SPAG5Q96R06 1193 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 DNAJC7Q99615 494 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 CHP1Q99653 195 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 KIFC3Q9BVG8 833 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 IKZF4Q9H2S9 585 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 R3HDMLQ9H3Y0 253 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 PRM3Q9NNZ6 103 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 CEP72Q9P209 647 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 CGNQ9P2M7 1197 aaKnown RBP7.43□□□□□ -1.22
MSH2-204ENST00000461394 TRPC6Q9Y210 931 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 SIK3Q9Y2K2 1263 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 TELO2Q9Y4R8 837 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 SYNGAP1Q96PV0 1343 aa7.43□□□□□ -1.22
MSH2-204ENST00000461394 GSTTP1A0A1W2PQM5 241 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 GOLGA8IPA6NC78 632 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 LRRC53A6NM62 1247 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 GOLGA8JA6NMD2 632 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 AKR1B10O60218 316 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 NDUFA10O95299 355 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 TRIM49P0CI25 452 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 TRIM49CP0CI26 452 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 ADORA2AP29274 412 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 RFC5P40937 340 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 NPTX2P47972 431 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 LIG4P49917 911 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 MYL7Q01449 175 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 ARID5AQ03989 594 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 CETN1Q12798 172 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 PPP2R5AQ15172 486 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 TAF1CQ15572 869 aaPredicted RBP7.42□□□□□ -1.22
MSH2-204ENST00000461394 NFIL3Q16649 462 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 EXOC3L4Q17RC7 722 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 CELF3Q5SZQ8 465 aaKnown RBP7.42□□□□□ -1.22
MSH2-204ENST00000461394 PDXDC1Q6P996 788 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms