RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 FGFR1P11362 822 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 BMP1P13497 986 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 SFPQP23246 707 aaKnown RBP eCLIP17.15■□□□□ 0.34
VARS-219ENST00000461328 FAM189BP81408 668 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 CUL4AQ13619 759 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 TCEAL5Q5H9L2 206 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 HAUS3Q68CZ6 603 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 KSR1Q8IVT5 923 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 ZNF579Q8NAF0 562 aaKnown RBP17.15■□□□□ 0.34
VARS-219ENST00000461328 PSPC1Q8WXF1 523 aaKnown RBP17.15■□□□□ 0.34
VARS-219ENST00000461328 P2RX5Q93086 422 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 TMEM143Q96AN5 459 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 UHRF1Q96T88 793 aaPredicted RBP17.15■□□□□ 0.34
VARS-219ENST00000461328 MTRQ99707 1265 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 HSD17B14Q9BPX1 270 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 RAB34Q9BZG1 259 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 INO80BQ9C086 356 aaPredicted RBP17.15■□□□□ 0.34
VARS-219ENST00000461328 UBE2ZQ9H832 354 aaPredicted RBP17.15■□□□□ 0.34
VARS-219ENST00000461328 ALG13Q9NP73 1137 aaKnown RBP17.15■□□□□ 0.34
VARS-219ENST00000461328 AAASQ9NRG9 546 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 PLAGL2Q9UPG8 496 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 COL4A3BPQ9Y5P4 624 aa17.15■□□□□ 0.34
VARS-219ENST00000461328 VPS37CA5D8V6 355 aaPredicted RBP17.14■□□□□ 0.33
VARS-219ENST00000461328 HOXA2O43364 376 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 LYPLA2O95372 231 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 TOB1P50616 345 aaPredicted RBP17.14■□□□□ 0.33
VARS-219ENST00000461328 PTGDRQ13258 359 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 NAALADL2Q58DX5 795 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 RILPL1Q5EBL4 403 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 ECHDC2Q86YB7 292 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 ABI1Q8IZP0 508 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 KLHL23Q8NBE8 558 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 RNF169Q8NCN4 708 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 PIGOQ8TEQ8 1089 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 TCP11Q8WWU5 503 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 DHX33Q9H6R0 707 aaKnown RBP17.14■□□□□ 0.33
VARS-219ENST00000461328 TUFT1Q9NNX1 390 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 ANKEF1Q9NU02 776 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 DACT1Q9NYF0 836 aa17.14■□□□□ 0.33
VARS-219ENST00000461328 K7ELQ4 463 aaPredicted RBP17.13■□□□□ 0.33
VARS-219ENST00000461328 PDCP20941 246 aa17.13■□□□□ 0.33
VARS-219ENST00000461328 KCNA5P22460 613 aa17.13■□□□□ 0.33
VARS-219ENST00000461328 POTEGQ6S5H5 508 aa17.13■□□□□ 0.33
VARS-219ENST00000461328 EP400NLQ6ZTU2 488 aa17.13■□□□□ 0.33
VARS-219ENST00000461328 PRPF31Q8WWY3 499 aaKnown RBP17.13■□□□□ 0.33
VARS-219ENST00000461328 TMEM117Q9H0C3 514 aa17.13■□□□□ 0.33
VARS-219ENST00000461328 CHST12Q9NRB3 414 aa17.13■□□□□ 0.33
VARS-219ENST00000461328 FOXD4L1Q9NU39 408 aa17.13■□□□□ 0.33
VARS-219ENST00000461328 PCDHB12Q9Y5F1 795 aa17.13■□□□□ 0.33
VARS-219ENST00000461328 KIAA1671Q9BY89 1806 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 A0A087WWV3 80 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.12■□□□□ 0.33
VARS-219ENST00000461328 A0A0U1RQF3 1178 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 TNFRSF10AO00220 468 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 LAD1O00515 517 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 USO1O60763 962 aaKnown RBP17.12■□□□□ 0.33
VARS-219ENST00000461328 MED24O75448 989 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 DGAT1O75907 488 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 ITGB1P05556 798 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 SRGAP2CP0DJJ0 459 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 CCT6AP40227 531 aaKnown RBP17.12■□□□□ 0.33
VARS-219ENST00000461328 RARRES1P49788 294 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.332e-9■■■■■ 27.8
VARS-219ENST00000461328 CATSPER4Q7RTX7 472 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 CATSPER3Q86XQ3 398 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 NECAB3Q96P71 396 aaPredicted RBP17.12■□□□□ 0.33
VARS-219ENST00000461328 POLR3CQ9BUI4 534 aaPredicted RBP17.12■□□□□ 0.33
VARS-219ENST00000461328 TYW1Q9NV66 732 aaKnown RBP17.12■□□□□ 0.33
VARS-219ENST00000461328 LRWD1Q9UFC0 647 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 PIN4Q9Y237 131 aaKnown RBP17.12■□□□□ 0.33
VARS-219ENST00000461328 VCANP13611 3396 aa17.12■□□□□ 0.33
VARS-219ENST00000461328 FNDC1Q4ZHG4 1894 aaPredicted RBP17.12■□□□□ 0.33
VARS-219ENST00000461328 SPATA31C1P0DKV0 1188 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 LAG3P18627 525 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 RPA1P27694 616 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 LAMTOR4Q0VGL1 99 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 CSPP1Q1MSJ5 1256 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
VARS-219ENST00000461328 DTHD1Q6ZMT9 781 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 HSCBQ8IWL3 235 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 C4orf32Q8N8J7 132 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 SPPL3Q8TCT6 385 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 SNX29Q8TEQ0 813 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 POF1BQ8WVV4 589 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 PABPC5Q96DU9 382 aaKnown RBP17.11■□□□□ 0.33
VARS-219ENST00000461328 CASD1Q96PB1 797 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 NACC1Q96RE7 527 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.11■□□□□ 0.33
VARS-219ENST00000461328 RNF19AQ9NV58 838 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 HCSTQ9UBK5 93 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 STK24Q9Y6E0 443 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 ARID2Q68CP9 1835 aa17.11■□□□□ 0.33
VARS-219ENST00000461328 ARHGEF35A5YM69 484 aa17.1■□□□□ 0.33
VARS-219ENST00000461328 ASAP2O43150 1006 aa17.1■□□□□ 0.33
VARS-219ENST00000461328 NCK2O43639 380 aa17.1■□□□□ 0.33
VARS-219ENST00000461328 EOMESO95936 686 aa17.1■□□□□ 0.33
VARS-219ENST00000461328 SKIP12755 728 aa17.1■□□□□ 0.33
VARS-219ENST00000461328 DNAJB1P25685 340 aa17.1■□□□□ 0.33
VARS-219ENST00000461328 PRPHP41219 470 aa17.1■□□□□ 0.33
VARS-219ENST00000461328 PHKA2P46019 1235 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms