RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 PCDH12Q9NPG4 1184 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 ATP8A2Q9NTI2 1148 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 PI4KBQ9UBF8 816 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 EMC9Q9Y3B6 208 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 MRPS23Q9Y3D9 190 aaKnown RBP9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 PCDHB12Q9Y5F1 795 aa9.52□□□□□ -0.89
ECHDC1-212ENST00000461239 hCG_2014768A0A024R1R8 64 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 ITGA4P13612 1032 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 ZNF445P59923 1031 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 GRM1Q13255 1194 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 SNW1Q13573 536 aaKnown RBP9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 NOL9Q5SY16 702 aaKnown RBP9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 C12orf60Q5U649 245 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 TICAM2Q86XR7 235 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 ARHGEF39Q8N4T4 335 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 ADCY4Q8NFM4 1077 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 WNK4Q96J92 1243 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 HELLSQ9NRZ9 838 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 MCM9Q9NXL9 1143 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 THSD7BQ9C0I4 1608 aa9.51□□□□□ -0.89
ECHDC1-212ENST00000461239 MYH1P12882 1939 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 TRBV23-1A0A0A0MS06 115 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 LEFTY1O75610 366 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 FGFR1P11362 822 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 CHMLP26374 656 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 SHMT1P34896 483 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 KIF23Q02241 960 aaPredicted RBP9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 C21orf62-AS1Q17RA5 79 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 MCMDC2Q4G0Z9 681 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 TATDN1Q6P1N9 297 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 CWC27Q6UX04 472 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 ALYREFQ86V81 257 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 FOXP4Q8IVH2 680 aaPredicted RBP9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 TRIM59Q8IWR1 403 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 IFNL3Q8IZI9 196 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 SLC44A5Q8NCS7 719 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 NINJ1Q92982 152 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 HOOK2Q96ED9 719 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 DYNLL2Q96FJ2 89 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 CDC6Q99741 560 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 CGGBP1Q9UFW8 167 aaPredicted RBP9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 HERC5Q9UII4 1024 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 NAV1Q8NEY1 1877 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 AK9Q5TCS8 1911 aa9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 BAZ2AQ9UIF9 1905 aaKnown RBP9.5□□□□□ -0.89
ECHDC1-212ENST00000461239 CTNND1O60716 968 aaKnown RBP9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 LRRN2O75325 713 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 RFPL3O75679 317 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 HSPD1P10809 573 aaKnown RBP9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 CDK11BP21127 795 aaKnown RBP9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 IBSPP21815 317 aaPredicted RBP9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 GUCY1A2P33402 732 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 MAP2K2P36507 400 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 ECE1P42892 770 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 IGBP1P78318 339 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 NOGQ13253 232 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 MOGSQ13724 837 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 SBK1Q52WX2 424 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 TM4SF20Q53R12 229 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 SCYL3Q8IZE3 742 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 OPTNQ96CV9 577 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 PTPN18Q99952 460 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 SSBP4Q9BWG4 385 aaPredicted RBP9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 PRDM14Q9GZV8 571 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 PRR13Q9NZ81 148 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 SERPINB13Q9UIV8 391 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 AKT3Q9Y243 479 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 FHOD1Q9Y613 1164 aa9.49□□□□□ -0.89
ECHDC1-212ENST00000461239 PLD2O14939 933 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 GDF11O95390 407 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 HLA-DOAP06340 250 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 ZBTB48P10074 688 aaPredicted RBP9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 PABPC1P11940 636 aaKnown RBP9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 GNAT2P19087 354 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 AMPD3Q01432 767 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 PABPC4Q13310 644 aaKnown RBP eCLIP9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 NFKBIBQ15653 356 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 BMP2KLQ5H9B9 411 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 GPAT2Q6NUI2 795 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 BEND4Q6ZU67 534 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 FAM214BQ7L5A3 538 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 ERO1BQ86YB8 467 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 SCUBE1Q8IWY4 988 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 SYTL5Q8TDW5 730 aaPredicted RBP9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 GATA6Q92908 595 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 BRF1Q92994 677 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 MFSD3Q96ES6 412 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 Q96M66 194 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 INCENPQ9NQS7 918 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 FBXL21Q9UKT6 434 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 TPX2Q9ULW0 747 aaKnown RBP9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 CCDC171Q6TFL3 1326 aa9.48□□□□□ -0.89
ECHDC1-212ENST00000461239 PHIPQ8WWQ0 1821 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 IGF2BP3O00425 579 aaKnown RBP eCLIP9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 NOP56O00567 594 aaKnown RBP9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 PRODHO43272 600 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 FGAP02671 866 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 TM4SF4P48230 202 aa9.47□□□□□ -0.89
ECHDC1-212ENST00000461239 PPATQ06203 517 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms