RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 RCOR1Q9UKL0 485 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 GINS2Q9Y248 185 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 EVPLQ92817 2033 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 LRIT3Q3SXY7 679 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 RHPN2Q8IUC4 686 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 DBF4BQ8NFT6 615 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 TMEM143Q96AN5 459 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 CLIC6Q96NY7 704 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 OSMRQ99650 979 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 TIPINQ9BVW5 301 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 FTHL17Q9BXU8 183 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 GCOM2Q9BZD3 368 aaPredicted RBP12.29□□□□□ -0.44
APTX-209ENST00000460940 SCAND2PQ9GZW5 306 aaPredicted RBP12.29□□□□□ -0.44
APTX-209ENST00000460940 BMP2KQ9NSY1 1161 aaPredicted RBP12.29□□□□□ -0.44
APTX-209ENST00000460940 TMEM51Q9NW97 253 aa12.29□□□□□ -0.44
APTX-209ENST00000460940 A0A087WWV3 80 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 ZBBXA8MT70 800 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 E9PMD0 336 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 GPR182O15218 404 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 RPS6KA5O75582 802 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 DARSP14868 501 aaKnown RBP12.28□□□□□ -0.44
APTX-209ENST00000460940 PLCG1P19174 1290 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 EIF4BP23588 611 aaKnown RBP12.28□□□□□ -0.44
APTX-209ENST00000460940 ARL2P36404 184 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 KCNJ6P48051 423 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 ME1P48163 572 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 LAMTOR4Q0VGL1 99 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 TFDP1Q14186 410 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 KARSQ15046 597 aaKnown RBP12.28□□□□□ -0.44
APTX-209ENST00000460940 KCNK18Q7Z418 384 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 TET1Q8NFU7 2136 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 TMEM40Q8WWA1 233 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 PRPF31Q8WWY3 499 aaKnown RBP12.28□□□□□ -0.44
APTX-209ENST00000460940 KIFAP3Q92845 792 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 EPSTI1Q96J88 318 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 SLC9A7Q96T83 725 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 INO80BQ9C086 356 aaPredicted RBP12.28□□□□□ -0.44
APTX-209ENST00000460940 POLR3FQ9H1D9 316 aaPredicted RBP12.28□□□□□ -0.44
APTX-209ENST00000460940 AGO3Q9H9G7 860 aaKnown RBP12.28□□□□□ -0.44
APTX-209ENST00000460940 STK17AQ9UEE5 414 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 SLC4A7Q9Y6M7 1214 aa12.28□□□□□ -0.44
APTX-209ENST00000460940 PLA2G4BP0C869 781 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 SFPQP23246 707 aaKnown RBP eCLIP12.27□□□□□ -0.44
APTX-209ENST00000460940 CD52P31358 61 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 PHKA2P46019 1235 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 POU5F1BQ06416 359 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 CCDC73Q6ZRK6 1079 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 SYT2Q8N9I0 419 aaPredicted RBP12.27□□□□□ -0.44
APTX-209ENST00000460940 PHOSPHO2Q8TCD6 241 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 SPATA32Q96LK8 384 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 NLRP4Q96MN2 994 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 PPP1R16BQ96T49 567 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 CDHR5Q9HBB8 845 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 ERVK-5Q9HDB9 667 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 PADI3Q9ULW8 664 aa12.27□□□□□ -0.44
APTX-209ENST00000460940 NOC2LQ9Y3T9 749 aaKnown RBP12.27□□□□□ -0.44
APTX-209ENST00000460940 GUCY2CP25092 1073 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 SLC12A3P55017 1021 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 WDR5P61964 334 aaKnown RBP12.27□□□□□ -0.45
APTX-209ENST00000460940 PPP2R5AQ15172 486 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 PCBP1Q15365 356 aaKnown RBP eCLIP12.27□□□□□ -0.45
APTX-209ENST00000460940 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.45
APTX-209ENST00000460940 SPECC1Q5M775 1068 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 AXDND1Q5T1B0 1012 aaPredicted RBP12.27□□□□□ -0.45
APTX-209ENST00000460940 FAM102BQ5T8I3 360 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 USP49Q70CQ1 688 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 SRGAP1Q7Z6B7 1085 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 FAM228AQ86W67 206 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 LEO1Q8WVC0 666 aaPredicted RBP12.27□□□□□ -0.45
APTX-209ENST00000460940 RAD54LQ92698 747 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 DRC1Q96MC2 740 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 PLIN2Q99541 437 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 NFKBIZQ9BYH8 718 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 OSBPL7Q9BZF2 842 aa12.27□□□□□ -0.45
APTX-209ENST00000460940 CXXC1Q9P0U4 656 aaPredicted RBP12.27□□□□□ -0.45
APTX-209ENST00000460940 A0A087WZ62 844 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 AMHP03971 560 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 SSBP05455 408 aaKnown RBP eCLIP12.26□□□□□ -0.45
APTX-209ENST00000460940 ATP2A2P16615 1042 aaKnown RBP12.26□□□□□ -0.45
APTX-209ENST00000460940 GLRA2P23416 452 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 SMAD3P84022 425 aaKnown RBP12.26□□□□□ -0.45
APTX-209ENST00000460940 TCTN1Q2MV58 587 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 ZSCAN23Q3MJ62 389 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 RRAGBQ5VZM2 374 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 RINT1Q6NUQ1 792 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 C1orf186Q6ZWK4 172 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 IFNLR1Q8IU57 520 aaPredicted RBP12.26□□□□□ -0.45
APTX-209ENST00000460940 KSR1Q8IVT5 923 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 RNF149Q8NC42 400 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 ASAP3Q8TDY4 903 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 LARP4BQ92615 738 aaKnown RBP12.26□□□□□ -0.45
APTX-209ENST00000460940 FDXACB1Q9BRP7 624 aaPredicted RBP12.26□□□□□ -0.45
APTX-209ENST00000460940 BLOC1S4Q9NUP1 217 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 PCDHA7Q9UN72 937 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 ST3GAL5Q9UNP4 418 aa12.26□□□□□ -0.45
APTX-209ENST00000460940 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.25□□□□□ -0.45
APTX-209ENST00000460940 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.25□□□□□ -0.45
APTX-209ENST00000460940 SRGAP2CP0DJJ0 459 aa12.25□□□□□ -0.45
APTX-209ENST00000460940 PTENP60484 403 aa12.25□□□□□ -0.45
APTX-209ENST00000460940 CAPSQ13938 189 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms