RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.7■□□□□ 0.26
LMNB1-203ENST00000460265 TAAR1Q96RJ0 339 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 KIFC3Q9BVG8 833 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 MYOZ2Q9NPC6 264 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 RBM12Q9NTZ6 932 aaKnown RBP16.7■□□□□ 0.26
LMNB1-203ENST00000460265 NFU1Q9UMS0 254 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 STK24Q9Y6E0 443 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 LAMB2P55268 1798 aa16.7■□□□□ 0.26
LMNB1-203ENST00000460265 NOVP48745 357 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 AMPD2Q01433 879 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 MYL7Q01449 175 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 PAPD7Q5XG87 772 aaKnown RBP16.69■□□□□ 0.26
LMNB1-203ENST00000460265 EEPD1Q7L9B9 569 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 KCTD10Q9H3F6 313 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 COL5A3P25940 1745 aaPredicted RBP16.69■□□□□ 0.26
LMNB1-203ENST00000460265 TLR2O60603 784 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 KRT5P13647 590 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 RPS6P62753 249 aaKnown RBP16.69■□□□□ 0.26
LMNB1-203ENST00000460265 TNFAIP1Q13829 316 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 TTLL12Q14166 644 aaPredicted RBP16.69■□□□□ 0.26
LMNB1-203ENST00000460265 DALRD3Q5D0E6 543 aaKnown RBP16.69■□□□□ 0.26
LMNB1-203ENST00000460265 RNF207Q6ZRF8 634 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 FRMD5Q7Z6J6 570 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 SAAL1Q96ER3 474 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 KLHDC7AQ5VTJ3 777 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 TCHPQ9BT92 498 aa16.69■□□□□ 0.26
LMNB1-203ENST00000460265 IFT88Q13099 833 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 MCF2L2Q86YR7 1114 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 IL31RAQ8NI17 732 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 LENG9Q96B70 501 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 WRNIP1Q96S55 665 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 MRIQ9BWK5 157 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 NAV1Q8NEY1 1877 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 CYP3A7-CYP3A51PA0A087WV96 503 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 SSU72P8A0A1W2PR75 194 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 ZSCAN5CA6NGD5 496 aaPredicted RBP16.68■□□□□ 0.26
LMNB1-203ENST00000460265 FSBPO95073 299 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 CYP3A7P24462 503 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 SMTNP53814 917 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 HMGCS2P54868 508 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 SOX10P56693 466 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 ZKSCAN8Q15776 578 aaPredicted RBP16.68■□□□□ 0.26
LMNB1-203ENST00000460265 SNCBQ16143 134 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 ZNF571Q7Z3V5 609 aaPredicted RBP16.68■□□□□ 0.26
LMNB1-203ENST00000460265 CEP170P1Q96L14 293 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 RPAP3Q9H6T3 665 aaPredicted RBP16.68■□□□□ 0.26
LMNB1-203ENST00000460265 KRIT1O00522 736 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 OPA1O60313 960 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 FNTAP49354 379 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 EPHA7Q15375 998 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 CFAP58Q5T655 872 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 LMBR1Q8WVP7 490 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 DPH5Q9H2P9 285 aa16.68■□□□□ 0.26
LMNB1-203ENST00000460265 SPATS2LQ9NUQ6 558 aaKnown RBP16.68■□□□□ 0.26
LMNB1-203ENST00000460265 GOLGA6L7A0A1B0GV03 622 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 GOLGA6L10A6NI86 522 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 OPLAHO14841 1288 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 NOL4O94818 638 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 EGFRP00533 1210 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 GJC1P36383 396 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 TNNC1P63316 161 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 BAATQ14032 418 aaPredicted RBP16.67■□□□□ 0.26
LMNB1-203ENST00000460265 IFT20Q8IY31 132 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 MICALL2Q8IY33 904 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 ARMC2Q8NEN0 867 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 MXRA8Q9BRK3 442 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 POLR3CQ9BUI4 534 aaPredicted RBP16.67■□□□□ 0.26
LMNB1-203ENST00000460265 EVI5O60447 810 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 MOXD1Q6UVY6 613 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 USP20Q9Y2K6 914 aa16.67■□□□□ 0.26
LMNB1-203ENST00000460265 MYBL2P10244 700 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 BIRC3Q13489 604 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 ZCWPW2Q504Y3 356 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 NBPF12Q5TAG4 269 aaPredicted RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 TUFT1Q9NNX1 390 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 EMSYQ7Z589 1322 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 SMIM23A6NLE4 172 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 ATP2C2O75185 946 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 P4HBP07237 508 aaKnown RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 FECHP22830 423 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 QARSP47897 775 aaKnown RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 CCNHP51946 323 aaPredicted RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 SPIRE1Q08AE8 756 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 SNRNP48Q6IEG0 339 aaKnown RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 POMGNT1Q8WZA1 660 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 ATG4CQ96DT6 458 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 TLR10Q9BXR5 811 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 RNF146Q9NTX7 359 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 CPSF2Q9P2I0 782 aaKnown RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 CNOT7Q9UIV1 285 aaKnown RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 VAV3Q9UKW4 847 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 ASTN2O75129 1339 aaPredicted RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 BCRP11274 1271 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 ITGB5P18084 799 aa16.66■□□□□ 0.26
LMNB1-203ENST00000460265 ZNF211Q13398 564 aaPredicted RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 SPATS2Q86XZ4 545 aaKnown RBP16.66■□□□□ 0.26
LMNB1-203ENST00000460265 CREG2Q8IUH2 290 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms