RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 VSTM4Q8IW00 320 aa11.35□□□□□ -0.59
HERC4-207ENST00000460168 CCDC60Q8IWA6 550 aaPredicted RBP11.35□□□□□ -0.59
HERC4-207ENST00000460168 SCFD1Q8WVM8 642 aa11.35□□□□□ -0.59
HERC4-207ENST00000460168 TRIM6Q9C030 488 aaPredicted RBP11.35□□□□□ -0.59
HERC4-207ENST00000460168 VPS16Q9H269 839 aa11.35□□□□□ -0.59
HERC4-207ENST00000460168 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
HERC4-207ENST00000460168 OLFML3Q9NRN5 406 aa11.35□□□□□ -0.59
HERC4-207ENST00000460168 LIMA1Q9UHB6 759 aaKnown RBP11.35□□□□□ -0.59
HERC4-207ENST00000460168 TELO2Q9Y4R8 837 aa11.35□□□□□ -0.59
HERC4-207ENST00000460168 PLXNB2O15031 1838 aa11.35□□□□□ -0.59
HERC4-207ENST00000460168 PASKQ96RG2 1323 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 ASB14A6NK59 587 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 HIP1RO75146 1068 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 FGFR1OPO95684 399 aaKnown RBP11.34□□□□□ -0.59
HERC4-207ENST00000460168 VDRP11473 427 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 CASP5P51878 434 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 ODR4Q5SWX8 454 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 PLA2G4FQ68DD2 849 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 ABHD15Q6UXT9 468 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 OTUD6AQ7L8S5 288 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 IRF2BP1Q8IU81 584 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 FBXO16Q8IX29 292 aaPredicted RBP11.34□□□□□ -0.59
HERC4-207ENST00000460168 FAM178BQ8IXR5 827 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 ARMC2Q8NEN0 867 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 GOLGA5Q8TBA6 731 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 MLXIPQ9HAP2 919 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 ANKEF1Q9NU02 776 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 TAB2Q9NYJ8 693 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 LMCD1Q9NZU5 365 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 SEL1LQ9UBV2 794 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 MCM3APO60318 1980 aa11.34□□□□□ -0.59
HERC4-207ENST00000460168 MYH11P35749 1972 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 LRRC10BA6NIK2 292 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 IGF2BP3O00425 579 aaKnown RBP eCLIP11.33□□□□□ -0.59
HERC4-207ENST00000460168 FARP2O94887 1054 aaPredicted RBP11.33□□□□□ -0.59
HERC4-207ENST00000460168 GGPS1O95749 300 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 SUPT20HL2P0C7V6 817 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 ZNF131P52739 623 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 COPB1P53618 953 aaKnown RBP11.33□□□□□ -0.59
HERC4-207ENST00000460168 TAF1CQ15572 869 aaPredicted RBP11.33□□□□□ -0.59
HERC4-207ENST00000460168 LY6KQ17RY6 165 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 SPECC1LQ69YQ0 1117 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 ANO5Q75V66 913 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 GPR142Q7Z601 462 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 DPP9Q86TI2 863 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 ABRAQ8N0Z2 381 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 ZNF397Q8NF99 534 aaPredicted RBP11.33□□□□□ -0.59
HERC4-207ENST00000460168 BICD1Q96G01 975 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 CNOT6LQ96LI5 555 aaKnown RBP11.33□□□□□ -0.59
HERC4-207ENST00000460168 KCNF1Q9H3M0 494 aa11.33□□□□□ -0.59
HERC4-207ENST00000460168 ABT1Q9ULW3 272 aaKnown RBP11.33□□□□□ -0.59
HERC4-207ENST00000460168 WDR81Q562E7 1941 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 TEX33O43247 280 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 ZNF862O60290 1169 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 PEX14O75381 377 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 MYBP10242 640 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 MAPK4P31152 587 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 NPEPPSP55786 919 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 FKBP3Q00688 224 aaKnown RBP11.33□□□□□ -0.6
HERC4-207ENST00000460168 PRKCEQ02156 737 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 CRYMQ14894 314 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 METTL7BQ6UX53 244 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 ARMCX2Q7L311 632 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 LRRC8AQ8IWT6 810 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 CACTINQ8WUQ7 758 aaKnown RBP11.33□□□□□ -0.6
HERC4-207ENST00000460168 CEP170P1Q96L14 293 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 BAG1Q99933 345 aaPredicted RBP11.33□□□□□ -0.6
HERC4-207ENST00000460168 ZNF302Q9NR11 478 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 LARSQ9P2J5 1176 aaKnown RBP11.33□□□□□ -0.6
HERC4-207ENST00000460168 SEPT9Q9UHD8 586 aaPredicted RBP11.33□□□□□ -0.6
HERC4-207ENST00000460168 CPA4Q9UI42 421 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 TPX2Q9ULW0 747 aaKnown RBP11.33□□□□□ -0.6
HERC4-207ENST00000460168 MYH9P35579 1960 aaKnown RBP11.33□□□□□ -0.6
HERC4-207ENST00000460168 SYNGAP1Q96PV0 1343 aa11.33□□□□□ -0.6
HERC4-207ENST00000460168 PLXNA1Q9UIW2 1896 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 PRPF6O94906 941 aaKnown RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 SLC10A3P09131 477 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 NAT2P11245 290 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 PECAM1P16284 738 aaPredicted RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 SFPQP23246 707 aaKnown RBP eCLIP11.32□□□□□ -0.6
HERC4-207ENST00000460168 USP8P40818 1118 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 MTIF2P46199 727 aaKnown RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 LRMPQ12912 555 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 ARID5BQ14865 1188 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 KNOP1Q1ED39 458 aaKnown RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 STXBP4Q6ZWJ1 553 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 TRIM42Q8IWZ5 723 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 SMC1BQ8NDV3 1235 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 GIMAP7Q8NHV1 300 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 TUBGCP2Q9BSJ2 902 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 KCTD10Q9H3F6 313 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 IGSF9BQ9UPX0 1349 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 NOP56O00567 594 aaKnown RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 STK10O94804 968 aaKnown RBP11.32□□□□□ -0.6
HERC4-207ENST00000460168 ATG7O95352 703 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 ARIH2O95376 493 aa11.32□□□□□ -0.6
HERC4-207ENST00000460168 NMT1P30419 496 aaKnown RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms