RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 FGFR4P22455 802 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 KRT2P35908 639 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 PLCB3Q01970 1234 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 PLA2G4FQ68DD2 849 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 ZNF598Q86UK7 904 aaKnown RBP25.53■■□□□ 1.68
PTPN4-207ENST00000460162 RSPH1Q8WYR4 309 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 HAS1Q92839 578 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 FDXACB1Q9BRP7 624 aaPredicted RBP25.53■■□□□ 1.68
PTPN4-207ENST00000460162 TRAIPQ9BWF2 469 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 C11orf16Q9NQ32 467 aa25.53■■□□□ 1.68
PTPN4-207ENST00000460162 SUCLA2Q9P2R7 463 aaPredicted RBP25.53■■□□□ 1.68
PTPN4-207ENST00000460162 EYA4O95677 639 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 ALADP13716 330 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 FDPSP14324 419 aaKnown RBP25.52■■□□□ 1.68
PTPN4-207ENST00000460162 ME3Q16798 604 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 CLLU1OSQ5K130 101 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 LRRC55Q6ZSA7 311 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 POTEDQ86YR6 584 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 RHPN2Q8IUC4 686 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 RNF169Q8NCN4 708 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 MICAL1Q8TDZ2 1067 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 SLC7A3Q8WY07 619 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 MRPS27Q92552 414 aaKnown RBP25.52■■□□□ 1.68
PTPN4-207ENST00000460162 ZNF558Q96NG5 402 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 CDCA3Q99618 268 aaPredicted RBP25.52■■□□□ 1.68
PTPN4-207ENST00000460162 MRPL9Q9BYD2 267 aaKnown RBP25.52■■□□□ 1.68
PTPN4-207ENST00000460162 PCDHGC5Q9Y5F6 944 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 C5orf42Q9H799 3197 aa25.52■■□□□ 1.68
PTPN4-207ENST00000460162 FSCN2O14926 492 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 LARGE1O95461 756 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 GLP2RO95838 553 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 ATF7P17544 494 aaPredicted RBP25.51■■□□□ 1.67
PTPN4-207ENST00000460162 COASYQ13057 564 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 KCNT2Q6UVM3 1135 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 RBM23Q86U06 439 aaKnown RBP25.51■■□□□ 1.67
PTPN4-207ENST00000460162 EXOC8Q8IYI6 725 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 SLFN12Q8IYM2 578 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 SMRP1Q8NCR6 262 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 TNFRSF25Q93038 417 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 LXNQ9BS40 222 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 TLE6Q9H808 572 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 CLEC1BQ9P126 229 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 RAPGEFL1Q9UHV5 662 aa25.51■■□□□ 1.67
PTPN4-207ENST00000460162 MARCH6O60337 910 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 DTNBO60941 627 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 CSDE1O75534 798 aaKnown RBP25.5■■□□□ 1.67
PTPN4-207ENST00000460162 RFC5P40937 340 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 SPIRE1Q08AE8 756 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 NR5A1Q13285 461 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 EPHA7Q15375 998 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 EARS2Q5JPH6 523 aaKnown RBP25.5■■□□□ 1.67
PTPN4-207ENST00000460162 C4orf19Q8IY42 314 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 NECAB1Q8N987 351 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 NLRP4Q96MN2 994 aa25.5■■□□□ 1.67
PTPN4-207ENST00000460162 WRAP73Q9P2S5 460 aaPredicted RBP25.5■■□□□ 1.67
PTPN4-207ENST00000460162 PUF60Q9UHX1 559 aaKnown RBP25.5■■□□□ 1.67
PTPN4-207ENST00000460162 BAG4O95429 457 aaKnown RBP25.49■■□□□ 1.67
PTPN4-207ENST00000460162 SKIP12755 728 aa25.49■■□□□ 1.67
PTPN4-207ENST00000460162 POLGP54098 1239 aaPredicted RBP25.49■■□□□ 1.67
PTPN4-207ENST00000460162 NPEPPSP55786 919 aa25.49■■□□□ 1.67
PTPN4-207ENST00000460162 ERVFC1P60507 584 aa25.49■■□□□ 1.67
PTPN4-207ENST00000460162 DUSP6Q16828 381 aa25.49■■□□□ 1.67
PTPN4-207ENST00000460162 NSUN7Q8NE18 718 aaKnown RBP25.49■■□□□ 1.67
PTPN4-207ENST00000460162 HELQQ8TDG4 1101 aa25.49■■□□□ 1.67
PTPN4-207ENST00000460162 CEP170P1Q96L14 293 aa25.49■■□□□ 1.67
PTPN4-207ENST00000460162 DHX33Q9H6R0 707 aaKnown RBP25.49■■□□□ 1.67
PTPN4-207ENST00000460162 BARX2Q9UMQ3 279 aaPredicted RBP25.49■■□□□ 1.67
PTPN4-207ENST00000460162 PIN4Q9Y237 131 aaKnown RBP25.49■■□□□ 1.67
PTPN4-207ENST00000460162 HCN4Q9Y3Q4 1203 aa25.49■■□□□ 1.67
PTPN4-207ENST00000460162 COL4A3BPQ9Y5P4 624 aa25.49■■□□□ 1.67
PTPN4-207ENST00000460162 FAM86C2PA6NEL3 165 aa25.48■■□□□ 1.67
PTPN4-207ENST00000460162 FAM205CA6NFA0 338 aa25.48■■□□□ 1.67
PTPN4-207ENST00000460162 DCXO43602 365 aa25.48■■□□□ 1.67
PTPN4-207ENST00000460162 GAS2O43903 313 aaKnown RBP25.48■■□□□ 1.67
PTPN4-207ENST00000460162 YWHABP31946 246 aaKnown RBP25.48■■□□□ 1.67
PTPN4-207ENST00000460162 PHKA2P46019 1235 aa25.48■■□□□ 1.67
PTPN4-207ENST00000460162 RAB27AP51159 221 aa25.48■■□□□ 1.67
PTPN4-207ENST00000460162 TWF2Q6IBS0 349 aaKnown RBP25.48■■□□□ 1.67
PTPN4-207ENST00000460162 NCAPH2Q6IBW4 605 aa25.48■■□□□ 1.67
PTPN4-207ENST00000460162 TCF25Q9BQ70 676 aa25.48■■□□□ 1.67
PTPN4-207ENST00000460162 SRGAP2BP0DMP2 458 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 NEK4P51957 841 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 KRT17Q04695 432 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 CATSPER4Q7RTX7 472 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 KSR1Q8IVT5 923 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 PSPC1Q8WXF1 523 aaKnown RBP25.47■■□□□ 1.67
PTPN4-207ENST00000460162 ZSWIM4Q9H7M6 989 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 IFT122Q9HBG6 1241 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 NGRNQ9NPE2 291 aaKnown RBP25.47■■□□□ 1.67
PTPN4-207ENST00000460162 ENTPD7Q9NQZ7 604 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 SPG21Q9NZD8 308 aa25.47■■□□□ 1.67
PTPN4-207ENST00000460162 CARNS1A5YM72 827 aa25.46■■□□□ 1.67
PTPN4-207ENST00000460162 PRR33A8MZF0 331 aa25.46■■□□□ 1.67
PTPN4-207ENST00000460162 PER2O15055 1255 aa25.46■■□□□ 1.67
PTPN4-207ENST00000460162 PBX3P40426 434 aa25.46■■□□□ 1.67
PTPN4-207ENST00000460162 PLPP4Q5VZY2 271 aa25.46■■□□□ 1.67
PTPN4-207ENST00000460162 OTUD6AQ7L8S5 288 aa25.46■■□□□ 1.67
PTPN4-207ENST00000460162 SLC39A11Q8N1S5 342 aa25.46■■□□□ 1.67
PTPN4-207ENST00000460162 TCP11Q8WWU5 503 aa25.46■■□□□ 1.67
PTPN4-207ENST00000460162 AGPAT5Q9NUQ2 364 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms