RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 NUMBLQ9Y6R0 609 aa4.51□□□□□ -1.69
VPS8-215ENST00000460158 TNKSO95271 1327 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 A0A0A6YYJ9 748 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 MYBL2P10244 700 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 STAT5BP51692 787 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 MAP3K12Q12852 859 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 TRIM25Q14258 630 aaKnown RBP4.5□□□□□ -1.69
VPS8-215ENST00000460158 EIF4HQ15056 248 aaKnown RBP4.5□□□□□ -1.69
VPS8-215ENST00000460158 DGKDQ16760 1214 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 UGT8Q16880 541 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 RGL3Q3MIN7 710 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 FAM26FQ5R3K3 315 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 PGM2L1Q6PCE3 622 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 Q6ZUG5 572 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 LARP4Q71RC2 724 aaKnown RBP eCLIP4.5□□□□□ -1.69
VPS8-215ENST00000460158 SLC41A1Q8IVJ1 513 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 C1orf162Q8NEQ5 155 aaPredicted RBP4.5□□□□□ -1.69
VPS8-215ENST00000460158 CEP89Q96ST8 783 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 NOL10Q9BSC4 688 aaKnown RBP4.5□□□□□ -1.69
VPS8-215ENST00000460158 QRSL1Q9H0R6 528 aaKnown RBP4.5□□□□□ -1.69
VPS8-215ENST00000460158 KCTD10Q9H3F6 313 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 CCM2LQ9NUG4 571 aaPredicted RBP4.5□□□□□ -1.69
VPS8-215ENST00000460158 USP18Q9UMW8 372 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 MYRFQ9Y2G1 1151 aa4.5□□□□□ -1.69
VPS8-215ENST00000460158 A0A0A6YYK5 440 aaPredicted RBP4.49□□□□□ -1.69
VPS8-215ENST00000460158 PRICKLE3O43900 615 aaPredicted RBP4.49□□□□□ -1.69
VPS8-215ENST00000460158 CUTAO60888 179 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 HMGCRP04035 888 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 ZNF888P0CJ79 500 aaPredicted RBP4.49□□□□□ -1.69
VPS8-215ENST00000460158 CSF2RBP32927 897 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 ETV4P43268 484 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 LGALS4P56470 323 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 SRSF2Q01130 221 aaKnown RBP4.49□□□□□ -1.69
VPS8-215ENST00000460158 PTPN21Q16825 1174 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS8-215ENST00000460158 TOR2AQ5JU69 321 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 GPR155Q7Z3F1 870 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 BMP8AQ7Z5Y6 402 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 MBD6Q96DN6 1003 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 FUBP3Q96I24 572 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS8-215ENST00000460158 AJUBAQ96IF1 538 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 DYDC2Q96IM9 177 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 FAXDC2Q96IV6 333 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 PSMD1Q99460 953 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 SOX7Q9BT81 388 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 HAPLN2Q9GZV7 340 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 KATNBL1Q9H079 304 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 WNT8AQ9H1J5 351 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 DNAJC28Q9NX36 388 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 SAE1Q9UBE0 346 aaPredicted RBP4.49□□□□□ -1.69
VPS8-215ENST00000460158 PRSS50Q9UI38 385 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 PTPN22Q9Y2R2 807 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 ZDHHC9Q9Y397 364 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 PCDHB6Q9Y5E3 794 aa4.49□□□□□ -1.69
VPS8-215ENST00000460158 SHTN1A0MZ66 631 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 TRIM75PA6NK02 468 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 FZD9O00144 591 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 MAFGO15525 162 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 ALDH1L1O75891 902 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 RBP3P10745 1247 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 PPARAQ07869 468 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 PCBP2Q15366 365 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS8-215ENST00000460158 TRIM68Q6AZZ1 485 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 GAREM2Q75VX8 874 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 KCNK18Q7Z418 384 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 REXO1L1PQ8IX06 675 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 AMOTL1Q8IY63 956 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 IFNL2Q8IZJ0 200 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 KLHL36Q8N4N3 616 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 CDYL2Q8N8U2 506 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 GAB3Q8WWW8 586 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 LCORQ96JN0 433 aaPredicted RBP4.48□□□□□ -1.69
VPS8-215ENST00000460158 HIST1H2AHQ96KK5 128 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 HIST1H2AJQ99878 128 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 CARD11Q9BXL7 1154 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 BARX1Q9HBU1 254 aaPredicted RBP4.48□□□□□ -1.69
VPS8-215ENST00000460158 POLR3BQ9NW08 1133 aaPredicted RBP4.48□□□□□ -1.69
VPS8-215ENST00000460158 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS8-215ENST00000460158 DPP7Q9UHL4 492 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 EVLQ9UI08 416 aaPredicted RBP4.48□□□□□ -1.69
VPS8-215ENST00000460158 DNAI1Q9UI46 699 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 ADAM29Q9UKF5 820 aa4.48□□□□□ -1.69
VPS8-215ENST00000460158 MROH6A6NGR9 719 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 C9orf118A6NHY6 69 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 K7ESM1 405 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 PCDHGA12O60330 932 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 NOBOXO60393 691 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 CFBP00751 764 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 S100BP04271 92 aaPredicted RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 OSMP13725 252 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 INSRRP14616 1297 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 MTNR1BP49286 362 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 NEK2P51955 445 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 RRADP55042 308 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 MRPS9P82933 396 aaKnown RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 CDK17Q00537 523 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 TTF1Q15361 905 aaPredicted RBP4.47□□□□□ -1.69
VPS8-215ENST00000460158 CLUL1Q15846 466 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 ODR4Q5SWX8 454 aa4.47□□□□□ -1.69
VPS8-215ENST00000460158 UBXN11Q5T124 520 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms