RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 C4orf32Q8N8J7 132 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 HLA-CQ95604 372 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 TMEM143Q96AN5 459 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 NLRP4Q96MN2 994 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 XPNPEP1Q9NQW7 623 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 CHST12Q9NRB3 414 aa18.41■□□□□ 0.54
SHANK2-213ENST00000460048 A0A0U1RQF3 1178 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 TBKBP1A7MCY6 615 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 FGFR1P11362 822 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 XRCC6P12956 609 aaKnown RBP eCLIP18.4■□□□□ 0.54
SHANK2-213ENST00000460048 SFPQP23246 707 aaKnown RBP eCLIP18.4■□□□□ 0.541e-6■■□□□ 13.7
SHANK2-213ENST00000460048 TOB1P50616 345 aaPredicted RBP18.4■□□□□ 0.54
SHANK2-213ENST00000460048 TIGD5Q53EQ6 642 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 TCP11Q8WWU5 503 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 PRPF31Q8WWY3 499 aaKnown RBP18.4■□□□□ 0.54
SHANK2-213ENST00000460048 PSPC1Q8WXF1 523 aaKnown RBP18.4■□□□□ 0.54
SHANK2-213ENST00000460048 MTRQ99707 1265 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 TRAIPQ9BWF2 469 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 TUFT1Q9NNX1 390 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 BMP2KQ9NSY1 1161 aaPredicted RBP18.4■□□□□ 0.54
SHANK2-213ENST00000460048 NOL7Q9UMY1 257 aaKnown RBP18.4■□□□□ 0.54
SHANK2-213ENST00000460048 PLAGL2Q9UPG8 496 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 KIF3AQ9Y496 699 aa18.4■□□□□ 0.54
SHANK2-213ENST00000460048 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.39■□□□□ 0.53
SHANK2-213ENST00000460048 ASAP2O43150 1006 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 TECP42680 631 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 RARRES1P49788 294 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 LAMTOR4Q0VGL1 99 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 NBR1Q14596 966 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 AAK1Q2M2I8 961 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 ZNF598Q86UK7 904 aaKnown RBP18.39■□□□□ 0.53
SHANK2-213ENST00000460048 FERMT3Q86UX7 667 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 CATSPER3Q86XQ3 398 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 CASD1Q96PB1 797 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 TMEM117Q9H0C3 514 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 CWH43Q9H720 699 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 DACT1Q9NYF0 836 aa18.39■□□□□ 0.53
SHANK2-213ENST00000460048 HOXA2O43364 376 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 MED24O75448 989 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 EOMESO95936 686 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 ITGB1P05556 798 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 BMP1P13497 986 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 ATF7P17544 494 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-213ENST00000460048 GJB2P29033 226 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 CAMK1Q14012 370 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 SRGAP1Q7Z6B7 1085 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 KLHL23Q8NBE8 558 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 SPPL3Q8TCT6 385 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 PIGOQ8TEQ8 1089 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 POLR3CQ9BUI4 534 aaPredicted RBP18.38■□□□□ 0.53
SHANK2-213ENST00000460048 NSUN3Q9H649 340 aaKnown RBP18.38■□□□□ 0.53
SHANK2-213ENST00000460048 ALG13Q9NP73 1137 aaKnown RBP18.38■□□□□ 0.53
SHANK2-213ENST00000460048 TYW1Q9NV66 732 aaKnown RBP18.38■□□□□ 0.53
SHANK2-213ENST00000460048 HCSTQ9UBK5 93 aa18.38■□□□□ 0.53
SHANK2-213ENST00000460048 A0A087WWV3 80 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 DGAT1O75907 488 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 SRGAP2CP0DJJ0 459 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 DNAJB1P25685 340 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 FXR2P51116 673 aaKnown RBP eCLIP18.37■□□□□ 0.53
SHANK2-213ENST00000460048 KCNQ1P51787 676 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 COL19A1Q14993 1142 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 TCEAL5Q5H9L2 206 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 CLLU1OSQ5K130 101 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 LRRC55Q6ZSA7 311 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 CATSPER4Q7RTX7 472 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 UBE2ZQ9H832 354 aaPredicted RBP18.37■□□□□ 0.53
SHANK2-213ENST00000460048 MINDY3Q9H8M7 445 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 AGPAT5Q9NUQ2 364 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 PIN4Q9Y237 131 aaKnown RBP18.37■□□□□ 0.53
SHANK2-213ENST00000460048 PCDHB6Q9Y5E3 794 aa18.37■□□□□ 0.53
SHANK2-213ENST00000460048 RPA1P27694 616 aa18.36■□□□□ 0.53
SHANK2-213ENST00000460048 ARL2P36404 184 aa18.36■□□□□ 0.53
SHANK2-213ENST00000460048 PHKA2P46019 1235 aa18.36■□□□□ 0.53
SHANK2-213ENST00000460048 POU5F1BQ06416 359 aa18.36■□□□□ 0.53
SHANK2-213ENST00000460048 MXD4Q14582 209 aaPredicted RBP18.36■□□□□ 0.53
SHANK2-213ENST00000460048 RNF149Q8NC42 400 aa18.36■□□□□ 0.53
SHANK2-213ENST00000460048 BACH2Q9BYV9 841 aa18.36■□□□□ 0.53
SHANK2-213ENST00000460048 DBR1Q9UK59 544 aaKnown RBP18.36■□□□□ 0.53
SHANK2-213ENST00000460048 ZNF623O75123 536 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 MUTP22033 750 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 PTGDRQ13258 359 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 SPOUT1Q5T280 376 aaKnown RBP18.35■□□□□ 0.53
SHANK2-213ENST00000460048 TWF2Q6IBS0 349 aaKnown RBP18.35■□□□□ 0.53
SHANK2-213ENST00000460048 IFNLR1Q8IU57 520 aaPredicted RBP18.35■□□□□ 0.53
SHANK2-213ENST00000460048 COLGALT1Q8NBJ5 622 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 ERMNQ8TAM6 284 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 ADAMTS19Q8TE59 1207 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 NACC1Q96RE7 527 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.35■□□□□ 0.53
SHANK2-213ENST00000460048 AAASQ9NRG9 546 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 FAM105AQ9NUU6 356 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 PCDHB12Q9Y5F1 795 aa18.35■□□□□ 0.53
SHANK2-213ENST00000460048 SKIP12755 728 aa18.34■□□□□ 0.53
SHANK2-213ENST00000460048 LAG3P18627 525 aa18.34■□□□□ 0.53
SHANK2-213ENST00000460048 HOXA11P31270 313 aaPredicted RBP18.34■□□□□ 0.53
SHANK2-213ENST00000460048 RAB27AP51159 221 aa18.34■□□□□ 0.53
SHANK2-213ENST00000460048 PTENP60484 403 aa18.34■□□□□ 0.53
SHANK2-213ENST00000460048 CAPSQ13938 189 aa18.34■□□□□ 0.53
SHANK2-213ENST00000460048 PDIA5Q14554 519 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms