RNA–Protein interactions for RNA: ENST00000459854.5

UFD1-205, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best)

Gene UFD1, Length 5,038 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-205ENST00000459854 PABPC4Q13310 644 aaKnown RBP eCLIP10.44□□□□□ -0.74
UFD1-205ENST00000459854 MED21Q13503 144 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 BYSLQ13895 437 aaKnown RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 KRT81Q14533 505 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 LSG1Q9H089 658 aaKnown RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 ETNK1Q9HBU6 452 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 APOBEC2Q9Y235 224 aaKnown RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 PRKAB2O43741 272 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 ZNF189O75820 626 aaPredicted RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 TRPC1P48995 793 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 FKBP1CQ5VVH2 108 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 OTUD7BQ6GQQ9 843 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 PPP4R3CPQ6ZMV5 832 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 BLIDQ8IZY5 108 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 REXO1Q8N1G1 1221 aaKnown RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 MRPL47Q9HD33 250 aaKnown RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 DCP1AQ9NPI6 582 aaPredicted RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 KCNQ5Q9NR82 932 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 C1orf112Q9NSG2 853 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 MAN1B1Q9UKM7 699 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 WTIPA6NIX2 430 aaPredicted RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 TFAP4Q01664 338 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 CTDSPL2Q05D32 466 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 PPP2R5DQ14738 602 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 SLC10A4Q96EP9 437 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 PRMT6Q96LA8 375 aaPredicted RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 DEFB129Q9H1M3 183 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 TAF1DQ9H5J8 278 aaPredicted RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 EIF3DO15371 548 aaKnown RBP eCLIP10.44□□□□□ -0.74
UFD1-205ENST00000459854 PRDM1O75626 825 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 AGTP01019 485 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 SRGAP2BP0DMP2 458 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 HNRNPH1P31943 449 aaKnown RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 ALX1Q15699 326 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 FAM26FQ5R3K3 315 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 KIRREL3Q8IZU9 778 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 ZNF473Q8WTR7 871 aaKnown RBP10.44□□□□□ -0.74
UFD1-205ENST00000459854 DDI1Q8WTU0 396 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 THAP11Q96EK4 314 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 CAPN11Q9UMQ6 739 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 ZNF541Q9H0D2 1346 aa10.44□□□□□ -0.74
UFD1-205ENST00000459854 GAP43P17677 238 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 MRPS15P82914 257 aaKnown RBP10.43□□□□□ -0.74
UFD1-205ENST00000459854 TMCO4Q5TGY1 634 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.43□□□□□ -0.74
UFD1-205ENST00000459854 MAGEA13PA6NCF6 341 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 YDJCA8MPS7 323 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 ASNSP08243 561 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 CCNE1P24864 410 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 ARHGDIAP52565 204 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 FKBP3Q00688 224 aaKnown RBP10.43□□□□□ -0.74
UFD1-205ENST00000459854 ADAM9Q13443 819 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 ARHGAP44Q17R89 818 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 RNF207Q6ZRF8 634 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 DYMQ7RTS9 669 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 FAM83AQ86UY5 434 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 LDHDQ86WU2 507 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 ACRBPQ8NEB7 543 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 PHKBQ93100 1093 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 FAM167BQ9BTA0 163 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 PANK4Q9NVE7 773 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 AFPP02771 609 aaKnown RBP10.43□□□□□ -0.74
UFD1-205ENST00000459854 LRRC63Q05C16 580 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 PRPSAP1Q14558 356 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 SPDYE2Q495Y8 402 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 PSPC1Q8WXF1 523 aaKnown RBP10.43□□□□□ -0.74
UFD1-205ENST00000459854 DNAJC9Q8WXX5 260 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 GID8Q9NWU2 228 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 C16orf96A6NNT2 1141 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 NVLO15381 856 aaKnown RBP10.43□□□□□ -0.74
UFD1-205ENST00000459854 TMCC1O94876 653 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 MAP3K10Q02779 954 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 ZNF589Q86UQ0 364 aaPredicted RBP10.43□□□□□ -0.74
UFD1-205ENST00000459854 THOC1Q96FV9 657 aaKnown RBP10.43□□□□□ -0.74
UFD1-205ENST00000459854 SGSM3Q96HU1 749 aa10.43□□□□□ -0.74
UFD1-205ENST00000459854 WNT10BO00744 389 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 ZMYND10O75800 440 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 CPP00450 1065 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 DEFA1P59665 94 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 DEFA3P59666 94 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 MAPRE2Q15555 327 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 LCA5Q86VQ0 697 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 HIC2Q96JB3 615 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 KIF2CQ99661 725 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 SH3GL2Q99962 352 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 KANSL2Q9H9L4 492 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 PARVBQ9HBI1 364 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 UTP6Q9NYH9 597 aaKnown RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 hCG_1984214I3L0E3 225 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 GSTA4O15217 222 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 ADCY3O60266 1144 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 PDIA3P30101 505 aaKnown RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 ICA1Q05084 483 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 MIGA2Q7L4E1 593 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 EPM2AIP1Q7L775 607 aaPredicted RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 NELFCDQ8IXH7 590 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 ZNF713Q8N859 430 aaPredicted RBP10.42□□□□□ -0.74
UFD1-205ENST00000459854 RNF169Q8NCN4 708 aa10.42□□□□□ -0.74
UFD1-205ENST00000459854 OR9Q1Q8NGQ5 310 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms