RNA–Protein interactions for RNA: ENST00000458153.5

MKLN1-206, Transcript of muskelin 1, human

TSL 2

Gene MKLN1, Length 2,448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MKLN1-206	ENST00000458153	RAB27A	P51159	221 aa		10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	ZNF746	Q6NUN9	644 aa	Predicted RBP	10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	SMC5	Q8IY18	1101 aa		10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	SRBD1	Q8N5C6	995 aa	Known RBP	10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	ZNF713	Q8N859	430 aa	Predicted RBP	10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	RIN2	Q8WYP3	895 aa	Predicted RBP	10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	HERC2P3	Q9BVR0	1158 aa		10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	RIC8A	Q9NPQ8	531 aa		10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	ARHGEF3	Q9NR81	526 aa		10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153	SSX2IP	Q9Y2D8	614 aa		10.3	□□□□□ -0.76
MKLN1-206	ENST00000458153		E7EWF7	191 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	PLEKHA8P1	O95397	391 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	CYP21A2	P08686	494 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	ATP4A	P20648	1035 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	ST3GAL2	Q16842	350 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	KANK3	Q6NY19	840 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	TMTC2	Q8N394	836 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	PJA1	Q8NG27	643 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	SECISBP2L	Q93073	1101 aa	Known RBP	10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	TMEM175	Q9BSA9	504 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	ANO3	Q9BYT9	981 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	PCDHGA2	Q9Y5H1	932 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	SPDYE4	A6NLX3	237 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	ANHX	E9PGG2	379 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	LILRB3	O75022	631 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	GALT	P07902	379 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	CFH	P08603	1231 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	GPC3	P51654	580 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	STARD6	P59095	220 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	CDC42EP1	Q00587	391 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	BCL7C	Q8WUZ0	217 aa	Predicted RBP	10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	AUTS2	Q8WXX7	1259 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	SHD	Q96IW2	340 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	VN1R3	Q9BXE9	311 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	OSBPL6	Q9BZF3	934 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	SIT1	Q9Y3P8	196 aa		10.29	□□□□□ -0.76
MKLN1-206	ENST00000458153	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.28	□□□□□ -0.76	5e-6	■□□□□ 9.7
MKLN1-206	ENST00000458153	PHKA2	P46019	1235 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	CLCN3	P51790	818 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	NLRP11	P59045	1033 aa	Known RBP	10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	SET	Q01105	290 aa	Predicted RBP	10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	NOMO2	Q5JPE7	1267 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	GLB1L	Q6UWU2	654 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	TMTC3	Q6ZXV5	915 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	TMEM173	Q86WV6	379 aa	Predicted RBP	10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	SLC44A3	Q8N4M1	653 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	METTL13	Q8N6R0	699 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	PPP1R16B	Q96T49	567 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	NRDE2	Q9H7Z3	1164 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	TBC1D13	Q9NVG8	400 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	NCDN	Q9UBB6	729 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	CA14	Q9ULX7	337 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	AKT3	Q9Y243	479 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	ZFP37	Q9Y6Q3	630 aa	Predicted RBP	10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	DHX15	O43143	795 aa	Known RBP	10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	N4BP1	O75113	896 aa	Known RBP	10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	PSAP	P07602	524 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	KLRC2	P26717	231 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	CHD1L	Q86WJ1	897 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	CKAP2L	Q8IYA6	745 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	RNF169	Q8NCN4	708 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	RUFY2	Q8WXA3	655 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	TMEM87B	Q96K49	555 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	EPC1	Q9H2F5	836 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	TBC1D22B	Q9NU19	505 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	TCEAL9	Q9UHQ7	104 aa		10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	EP300	Q09472	2414 aa	Predicted RBP	10.28	□□□□□ -0.76
MKLN1-206	ENST00000458153	NT5C1B-RDH14	C9J2C7	533 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	STK25	O00506	426 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	SH2B2	O14492	632 aa	Predicted RBP	10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	ZNF623	O75123	536 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	CYP3A4	P08684	503 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	GBP2	P32456	591 aa	Predicted RBP	10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	ADCY7	P51828	1080 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	ATXN1	P54253	815 aa	Known RBP	10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	NUCB1	Q02818	461 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	HTR4	Q13639	388 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	VARS2	Q5ST30	1063 aa	Known RBP	10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	SWSAP1	Q6NVH7	229 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	DCLRE1A	Q6PJP8	1040 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	GPR65	Q8IYL9	337 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	MAML2	Q8IZL2	1156 aa	Predicted RBP	10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	NELL1	Q92832	810 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	DDX23	Q9BUQ8	820 aa	Known RBP	10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	IL25	Q9H293	177 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	MAN1C1	Q9NR34	630 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	CDV3	Q9UKY7	258 aa	Known RBP	10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	CEP250	Q9BV73	2442 aa		10.27	□□□□□ -0.76
MKLN1-206	ENST00000458153	CNTNAP2	Q9UHC6	1331 aa		10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	INPPL1	O15357	1258 aa		10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	LILRB5	O75023	590 aa		10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	ADH1A	P07327	375 aa		10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	CNP	P09543	421 aa	Known RBP	10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	LIFR	P42702	1097 aa		10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	SLC11A1	P49279	550 aa		10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	CLK2	P49760	499 aa	Known RBP	10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	EFCAB12	Q6NXP0	572 aa		10.27	□□□□□ -0.77
MKLN1-206	ENST00000458153	CASC1	Q6TDU7	716 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms