RNA–Protein interactions for RNA: ENST00000457845.4

TRAPPC12-212, Transcript of trafficking protein particle complex 12, humanhuman

TSL 4

Gene TRAPPC12, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-212ENST00000457845 PTENP60484 403 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 AMPD3Q01432 767 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 CAPSQ13938 189 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 KIZQ2M2Z5 673 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 FAM102BQ5T8I3 360 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 KRBA2Q6ZNG9 492 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 FAM43BQ6ZT52 329 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 MAEAQ7L5Y9 396 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 ELOA2Q8IYF1 753 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 TMEM40Q8WWA1 233 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 DDX12PQ92771 950 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 BADQ92934 168 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 C7orf25Q9BPX7 421 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 TRIM9Q9C026 710 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 POLD4Q9HCU8 107 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 KCNG1Q9UIX4 513 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 TTC3P53804 2025 aa13.03□□□□□ -0.32
TRAPPC12-212ENST00000457845 A0A087WZ62 844 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 NR1I2O75469 434 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 MYL1P05976 194 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 PFKMP08237 780 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 DARSP14868 501 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 CSF2RAP15509 400 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 EIF4BP23588 611 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 NAMPTP43490 491 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 TFDP1Q14186 410 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 LPIN1Q14693 890 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 PPP2R5AQ15172 486 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 PLEKHG4Q58EX7 1191 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 CDCA2Q69YH5 1023 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 SRGAP1Q7Z6B7 1085 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 CEP57L1Q8IYX8 460 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 RNF149Q8NC42 400 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 SPIRE2Q8WWL2 714 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 STAMQ92783 540 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 PAGE5Q96GU1 130 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 OSMRQ99650 979 aa13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 FDXACB1Q9BRP7 624 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 AGO3Q9H9G7 860 aaKnown RBP13.02□□□□□ -0.33
TRAPPC12-212ENST00000457845 SFI1A8K8P3 1242 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 H0YGN5 161 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 SRGAP2CP0DJJ0 459 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 PLS3P13797 630 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 MDM2Q00987 491 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 FPGSQ05932 587 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 RAD51AP2Q09MP3 1159 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 PPIGQ13427 754 aaKnown RBP eCLIP13.01□□□□□ -0.336e-7■■□□□ 12.1
TRAPPC12-212ENST00000457845 PCBP1Q15365 356 aaKnown RBP eCLIP13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 TPRNQ4KMQ1 711 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 KANK3Q6NY19 840 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 C16orf59Q7L2K0 433 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 DYMQ7RTS9 669 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 RPUSD2Q8IZ73 545 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 CNNM3Q8NE01 707 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 IFT74Q96LB3 600 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 NLRP4Q96MN2 994 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 FIZ1Q96SL8 496 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 GDF15Q99988 308 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 GCOM2Q9BZD3 368 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 INO80BQ9C086 356 aaPredicted RBP13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 MINDY3Q9H8M7 445 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 PARVGQ9HBI0 331 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 IL23AQ9NPF7 189 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 PCDH10Q9P2E7 1040 aa13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 LARSQ9P2J5 1176 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 NOC2LQ9Y3T9 749 aaKnown RBP13.01□□□□□ -0.33
TRAPPC12-212ENST00000457845 ADGRA3Q8IWK6 1321 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 PVALEFA0A1B0GWK0 134 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 GOLGA6L22H0YM25 854 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 GTPBP6O43824 516 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-212ENST00000457845 RPS6KA5O75582 802 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 KRT18P05783 430 aaKnown RBP13□□□□□ -0.33
TRAPPC12-212ENST00000457845 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
TRAPPC12-212ENST00000457845 GHRP10912 638 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 AFMP43652 599 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 PHKA2P46019 1235 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 NPTX2P47972 431 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 PEX3P56589 373 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 EHHADHQ08426 723 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 CUL4BQ13620 913 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 FAM228AQ86W67 206 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 DBF4BQ8NFT6 615 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 NLRP7Q8WX94 980 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 ZNF668Q96K58 619 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-212ENST00000457845 PPP1R16BQ96T49 567 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 LBHD1Q9BQE6 289 aaPredicted RBP13□□□□□ -0.33
TRAPPC12-212ENST00000457845 FZD8Q9H461 694 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 ERVK-5Q9HDB9 667 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 ARHGAP28Q9P2N2 729 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 SEL1LQ9UBV2 794 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 PADI3Q9ULW8 664 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 GINS2Q9Y248 185 aa13□□□□□ -0.33
TRAPPC12-212ENST00000457845 LRRIQ4A6NIV6 560 aa12.99□□□□□ -0.33
TRAPPC12-212ENST00000457845 GPR182O15218 404 aa12.99□□□□□ -0.33
TRAPPC12-212ENST00000457845 KLRC4O43908 158 aa12.99□□□□□ -0.33
TRAPPC12-212ENST00000457845 TRAK2O60296 914 aa12.99□□□□□ -0.33
TRAPPC12-212ENST00000457845 TBCAO75347 108 aaKnown RBP12.99□□□□□ -0.33
TRAPPC12-212ENST00000457845 FAM13AO94988 1023 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms