RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PORP16435 677 aaPredicted RBP7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 ATP2B2Q01814 1243 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 GUCY1B3Q02153 619 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 ITIH3Q06033 890 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 PPP2R3AQ06190 1150 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 MAP3K11Q16584 847 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 NDUFA5Q16718 116 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 OTUD7BQ6GQQ9 843 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 FAM173BQ6P4H8 233 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 TMEM179Q6ZVK1 233 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 DQX1Q8TE96 717 aaKnown RBP7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 AZIN2Q96A70 460 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 IFT43Q96FT9 208 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 CSRNP1Q96S65 589 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 NOD2Q9HC29 1040 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 KRT82Q9NSB4 513 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 NYAP2Q9P242 653 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 SUCLA2Q9P2R7 463 aaPredicted RBP7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 XPO7Q9UIA9 1087 aaKnown RBP7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 STX8Q9UNK0 236 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 GRIN2DO15399 1336 aa7.4□□□□□ -1.23
CUBNP3-201ENST00000457461 PHIPQ8WWQ0 1821 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 TCP10L2B9ZVM9 353 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 FIBPO43427 364 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 PFDN1O60925 122 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 ANP32DO95626 131 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 EGFRP00533 1210 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 IL4RP24394 825 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 MXRA7P84157 204 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 RRP1BQ14684 758 aaKnown RBP7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 NONOQ15233 471 aaKnown RBP eCLIP7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 NPY5RQ15761 445 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 PFKFB3Q16875 520 aaPredicted RBP7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 CERKLQ49MI3 558 aaPredicted RBP7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 KAZNQ674X7 775 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 TMEM53Q6P2H8 277 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 SIAH1Q8IUQ4 282 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 MICALL2Q8IY33 904 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 FAM186BQ8IYM0 893 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 ALDH16A1Q8IZ83 802 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 GPC2Q8N158 579 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 CMTR1Q8N1G2 835 aaKnown RBP7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 WDR60Q8WVS4 1066 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 TEPSINQ96N21 525 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 CATSPER2Q96P56 530 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 HAPLN3Q96S86 360 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 TCF12Q99081 682 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 PHF20Q9BVI0 1012 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 FOXP1Q9H334 677 aaPredicted RBP7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 KANSL2Q9H9L4 492 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 GDPD2Q9HCC8 539 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 DDX19AQ9NUU7 478 aaKnown RBP7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 POLR3EQ9NVU0 708 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 RMND1Q9NWS8 449 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 MAP3K20Q9NYL2 800 aaKnown RBP7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 RCOR1Q9UKL0 485 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 LRRC42Q9Y546 428 aa7.39□□□□□ -1.23
CUBNP3-201ENST00000457461 FAM196BA6NMK8 535 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 TSPAN1O60635 241 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 GADD45BO75293 160 aaPredicted RBP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 HNRNPCP07910 306 aaKnown RBP eCLIP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 POTEIP0CG38 1075 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 SCG2P13521 617 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 YBX3P16989 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 PTPN2P17706 415 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 CD9P21926 228 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 CSTF2P33240 577 aaKnown RBP eCLIP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 TNNI2P48788 182 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 FOSBP53539 338 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 BPIFB4P59827 614 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 TYRO3Q06418 890 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 DMPKQ09013 629 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 ITGA7Q13683 1181 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 TNFAIP1Q13829 316 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 ZNF268Q14587 947 aaPredicted RBP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 PDCD4Q53EL6 469 aaKnown RBP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 ASPRV1Q53RT3 343 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 KLC3Q6P597 504 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 RASGRP2Q7LDG7 609 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 CLEC10AQ8IUN9 316 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 GRAMD2AQ8IUY3 354 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 ZSCAN29Q8IWY8 852 aaPredicted RBP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 LRRN4CLQ8ND94 238 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 USP6NLQ92738 828 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 TNFRSF25Q93038 417 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 SKA1Q96BD8 255 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 SDCCAG3Q96C92 435 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 DDX27Q96GQ7 796 aaKnown RBP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 CDHR1Q96JP9 859 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 USP28Q96RU2 1077 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 NAA15Q9BXJ9 866 aaKnown RBP7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 EPN3Q9H201 632 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 CENPHQ9H3R5 247 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 SEMA4AQ9H3S1 761 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 RIOX1Q9H6W3 641 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 CBX8Q9HC52 389 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 SH3GLB2Q9NR46 395 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 GPRC5DQ9NZD1 345 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 STK39Q9UEW8 545 aa7.38□□□□□ -1.23
CUBNP3-201ENST00000457461 CNOT7Q9UIV1 285 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms