RNA–Protein interactions for RNA: ENST00000457096.1

CROCCP4-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 4, humanhuman

BASIC

Gene CROCCP4, Length 498 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP4-201ENST00000457096 STK36Q9NRP7 1315 aa17.15■□□□□ 0.34
CROCCP4-201ENST00000457096 HIDE1A8MVS5 230 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 FSCN2O14926 492 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 JAK2O60674 1132 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 GPR37L1O60883 481 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 PSMC5P62195 406 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 LLGL2Q6P1M3 1020 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 KCNT2Q6UVM3 1135 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 ZNF598Q86UK7 904 aaKnown RBP17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 TMEM143Q96AN5 459 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 GCOM2Q9BZD3 368 aaPredicted RBP17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 AAASQ9NRG9 546 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 CDH22Q9UJ99 828 aa17.14■□□□□ 0.33
CROCCP4-201ENST00000457096 MAFO75444 373 aaPredicted RBP17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 CDKL5O76039 1030 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 LAG3P18627 525 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 ST3GAL1Q11201 340 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 PPP2R5CQ13362 524 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 CTTNQ14247 550 aaKnown RBP17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 NCAPH2Q6IBW4 605 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 ABI1Q8IZP0 508 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 DYDC2Q96IM9 177 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 CYP26B1Q9NR63 512 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 MUTYHQ9UIF7 546 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 PIN4Q9Y237 131 aaKnown RBP17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 FAM50BQ9Y247 325 aa17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
CROCCP4-201ENST00000457096 A0A087WWV3 80 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 A0A0U1RQF3 1178 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 QARSP47897 775 aaKnown RBP17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 CYP4A11Q02928 519 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 DUSP6Q16828 381 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 PPP4R3AQ6IN85 833 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 TMEM173Q86WV6 379 aaPredicted RBP17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 LRRC43Q8N309 656 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 SMRP1Q8NCR6 262 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 MRPS27Q92552 414 aaKnown RBP17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 TNFRSF25Q93038 417 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 PPP2R3CQ969Q6 453 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 CEP170P1Q96L14 293 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 ZNF558Q96NG5 402 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 TCF25Q9BQ70 676 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 ENTPD7Q9NQZ7 604 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
CROCCP4-201ENST00000457096 DCXO43602 365 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 B4GALT3O60512 393 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 EYA4O95677 639 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 PHKA2P46019 1235 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 UBE3AQ05086 875 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 SPIRE1Q08AE8 756 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 TWF2Q6IBS0 349 aaKnown RBP17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 NSUN7Q8NE18 718 aaKnown RBP17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 BCL7CQ8WUZ0 217 aaPredicted RBP17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 AUTS2Q8WXX7 1259 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 GTF3C6Q969F1 213 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 FAM20AQ96MK3 541 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 LXNQ9BS40 222 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 MINDY3Q9H8M7 445 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 IFT122Q9HBG6 1241 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 INPP5FQ9Y2H2 1132 aa17.11■□□□□ 0.33
CROCCP4-201ENST00000457096 MARCH6O60337 910 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 P4HBP07237 508 aaKnown RBP17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 SP100P23497 879 aaPredicted RBP17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 KRT2P35908 639 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 DNM2P50570 870 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 BCAR1P56945 870 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 PLCB3Q01970 1234 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 CATSPER4Q7RTX7 472 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 RNF135Q8IUD6 432 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 SLC39A11Q8N1S5 342 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 FEZF2Q8TBJ5 459 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 PRPF31Q8WWY3 499 aaKnown RBP17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 RNF216Q9NWF9 866 aaPredicted RBP17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 COL4A3BPQ9Y5P4 624 aa17.1■□□□□ 0.33
CROCCP4-201ENST00000457096 BTBD18B2RXH4 712 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 HOXA2O43364 376 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 GCFC2P16383 781 aaKnown RBP17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 XBP1P17861 261 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 YWHABP31946 246 aaKnown RBP17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 CA8P35219 290 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 PLA2G5P39877 138 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 AFF1P51825 1210 aaKnown RBP17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 NEK4P51957 841 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 POLGP54098 1239 aaPredicted RBP17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 ANAPC15P60006 121 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 GUCY1B3Q02153 619 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 COASYQ13057 564 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 EPHA7Q15375 998 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 TMC7Q7Z402 723 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 ZNF410Q86VK4 478 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 FAM177A1Q8N128 213 aaPredicted RBP17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 GBP3Q9H0R5 595 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 DHX33Q9H6R0 707 aaKnown RBP17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
CROCCP4-201ENST00000457096 ZC3H11AO75152 810 aaKnown RBP eCLIP17.08■□□□□ 0.32
CROCCP4-201ENST00000457096 EOMESO95936 686 aa17.08■□□□□ 0.32
CROCCP4-201ENST00000457096 ALADP13716 330 aa17.08■□□□□ 0.32
CROCCP4-201ENST00000457096 TECP42680 631 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms