RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ATP2C1P98194 919 aaPredicted RBP25.77■■□□□ 1.72
CBX3-204ENST00000456948 CCDC85BQ15834 202 aaPredicted RBP25.77■■□□□ 1.72
CBX3-204ENST00000456948 KSR1Q8IVT5 923 aa25.77■■□□□ 1.72
CBX3-204ENST00000456948 SNX29Q8TEQ0 813 aa25.77■■□□□ 1.72
CBX3-204ENST00000456948 TMEM161AQ9NX61 479 aa25.77■■□□□ 1.72
CBX3-204ENST00000456948 LMCD1Q9NZU5 365 aa25.77■■□□□ 1.72
CBX3-204ENST00000456948 PRUNE2Q8WUY3 3088 aa25.77■■□□□ 1.72
CBX3-204ENST00000456948 UNC80Q8N2C7 3258 aa25.76■■□□□ 1.72
CBX3-204ENST00000456948 C9IYK1 514 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 MGEA5O60502 916 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 ARHGEF15O94989 841 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 FAM189BP81408 668 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 DSC3Q14574 896 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 POTEGQ6S5H5 508 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 TMEM192Q8IY95 271 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 KCTD17Q8N5Z5 321 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 RNF149Q8NC42 400 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 ZNF689Q96CS4 500 aaPredicted RBP25.76■■□□□ 1.71
CBX3-204ENST00000456948 DNM3Q9UQ16 869 aa25.76■■□□□ 1.71
CBX3-204ENST00000456948 RB1P06400 928 aa25.75■■□□□ 1.71
CBX3-204ENST00000456948 SYT1P21579 422 aa25.75■■□□□ 1.71
CBX3-204ENST00000456948 POU5F1BQ06416 359 aa25.75■■□□□ 1.71
CBX3-204ENST00000456948 PTPROQ16827 1216 aa25.75■■□□□ 1.71
CBX3-204ENST00000456948 EPC2Q52LR7 807 aa25.75■■□□□ 1.71
CBX3-204ENST00000456948 ABI1Q8IZP0 508 aa25.75■■□□□ 1.71
CBX3-204ENST00000456948 C17orf80Q9BSJ5 609 aa25.75■■□□□ 1.71
CBX3-204ENST00000456948 KIAA1024Q9UPX6 916 aa25.75■■□□□ 1.71
CBX3-204ENST00000456948 RFXAPO00287 272 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 USO1O60763 962 aaKnown RBP25.74■■□□□ 1.71
CBX3-204ENST00000456948 EOMESO95936 686 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 GRB10Q13322 594 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 TWF2Q6IBS0 349 aaKnown RBP25.74■■□□□ 1.71
CBX3-204ENST00000456948 CRIPAKQ8N1N5 446 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 MICALL1Q8N3F8 863 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 CDK5RAP3Q96JB5 506 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 IFT122Q9HBG6 1241 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 PIN4Q9Y237 131 aaKnown RBP25.74■■□□□ 1.71
CBX3-204ENST00000456948 COL4A6Q14031 1691 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 CHD7Q9P2D1 2997 aa25.74■■□□□ 1.71
CBX3-204ENST00000456948 A0A0U1RQF3 1178 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 CSDE1O75534 798 aaKnown RBP25.73■■□□□ 1.71
CBX3-204ENST00000456948 ERLIN2O94905 339 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 FGFR4P22455 802 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 ARL2P36404 184 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 PADI6Q6TGC4 694 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 RSPH1Q8WYR4 309 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 AK8Q96MA6 479 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 C11orf84Q9BUA3 381 aaPredicted RBP25.73■■□□□ 1.71
CBX3-204ENST00000456948 PLVAPQ9BX97 442 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 ZSCAN16Q9H4T2 348 aaPredicted RBP25.73■■□□□ 1.71
CBX3-204ENST00000456948 XPNPEP1Q9NQW7 623 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 AAASQ9NRG9 546 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 FOXD4L1Q9NU39 408 aa25.73■■□□□ 1.71
CBX3-204ENST00000456948 DDX19AQ9NUU7 478 aaKnown RBP25.73■■□□□ 1.71
CBX3-204ENST00000456948 A0A087WWV3 80 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 VWA3AA6NCI4 1184 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 CTNNB1P35222 781 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 BMPR1AP36894 532 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 RAB27AP51159 221 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 SPOUT1Q5T280 376 aaKnown RBP25.72■■□□□ 1.71
CBX3-204ENST00000456948 FAM102BQ5T8I3 360 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 CLP1Q92989 425 aaKnown RBP25.72■■□□□ 1.71
CBX3-204ENST00000456948 TRAIPQ9BWF2 469 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 NT5C3AQ9H0P0 336 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 RC3H2Q9HBD1 1191 aaKnown RBP25.72■■□□□ 1.71
CBX3-204ENST00000456948 MTCH2Q9Y6C9 303 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 ARID2Q68CP9 1835 aa25.72■■□□□ 1.71
CBX3-204ENST00000456948 EPOPA6NHQ4 379 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 TBKBP1A7MCY6 615 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 SLC26A4O43511 780 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 CYP11B2P19099 503 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 PTENP60484 403 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 GPM6BQ13491 265 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 PAN2Q504Q3 1202 aaKnown RBP25.71■■□□□ 1.71
CBX3-204ENST00000456948 NAALADL2Q58DX5 795 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 ECHDC2Q86YB7 292 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 NFKBIZQ9BYH8 718 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 POLR3FQ9H1D9 316 aaPredicted RBP25.71■■□□□ 1.71
CBX3-204ENST00000456948 BHMT2Q9H2M3 363 aa25.71■■□□□ 1.71
CBX3-204ENST00000456948 H3BNC9 293 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 STX6O43752 255 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 AXLP30530 894 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 PPP2R5AQ15172 486 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 ZRSR1Q15695 479 aaKnown RBP25.7■■□□□ 1.7
CBX3-204ENST00000456948 MAEAQ7L5Y9 396 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 RNF169Q8NCN4 708 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 GDPD5Q8WTR4 605 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 PGBD4Q96DM1 585 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 TMEM117Q9H0C3 514 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 PRDM6Q9NQX0 595 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 AGPAT5Q9NUQ2 364 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 PCDHB12Q9Y5F1 795 aa25.7■■□□□ 1.7
CBX3-204ENST00000456948 INO80B-WBP1J3KQ70 363 aa25.69■■□□□ 1.7
CBX3-204ENST00000456948 UBA7P41226 1012 aa25.69■■□□□ 1.7
CBX3-204ENST00000456948 SF3A1Q15459 793 aaKnown RBP25.69■■□□□ 1.7
CBX3-204ENST00000456948 IL17AQ16552 155 aa25.69■■□□□ 1.7
CBX3-204ENST00000456948 CSPP1Q1MSJ5 1256 aa25.69■■□□□ 1.7
CBX3-204ENST00000456948 SPRED2Q7Z698 418 aa25.69■■□□□ 1.7
CBX3-204ENST00000456948 ZBTB8OSQ8IWT0 167 aa25.69■■□□□ 1.7
CBX3-204ENST00000456948 IFT74Q96LB3 600 aa25.69■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms