RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 TMEM150BA6NC51 233 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 MEIS3P2A8K0S8 358 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 NT5C1B-RDH14C9J2C7 533 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 CSDE1O75534 798 aaKnown RBP13.43□□□□□ -0.26
LMCD1-206ENST00000456506 PSMD10O75832 226 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 ZSCAN20P17040 1043 aaPredicted RBP13.43□□□□□ -0.26
LMCD1-206ENST00000456506 NUBP1P53384 320 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 BCAR1P56945 870 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 KRT17Q04695 432 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 ITIH3Q06033 890 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 KANK3Q6NY19 840 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 Q6ZUG5 572 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 PHKBQ93100 1093 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 DOCK6Q96HP0 2047 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 SNX27Q96L92 541 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 NECTIN4Q96NY8 510 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 MAP7D2Q96T17 732 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 RIT2Q99578 217 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 SORCS3Q9UPU3 1222 aa13.43□□□□□ -0.26
LMCD1-206ENST00000456506 M0R2N6 131 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 GALR2O43603 387 aaPredicted RBP13.42□□□□□ -0.26
LMCD1-206ENST00000456506 GFRA3O60609 400 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 HMGB1P09429 215 aaKnown RBP13.42□□□□□ -0.26
LMCD1-206ENST00000456506 WEE2P0C1S8 567 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 EPCAMP16422 314 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 TMOD1P28289 359 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 GNA11P29992 359 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 PHKA2P46019 1235 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 USP11P51784 963 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 EVCP57679 992 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 KRT32Q14532 448 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 TPRNQ4KMQ1 711 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 KIAA1841Q6NSI8 718 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 UBALD2Q8IYN6 164 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 ZDHHC14Q8IZN3 488 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 ABI1Q8IZP0 508 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 C12orf76Q8N812 135 aaPredicted RBP13.42□□□□□ -0.26
LMCD1-206ENST00000456506 CCDC12Q8WUD4 166 aaPredicted RBP13.42□□□□□ -0.26
LMCD1-206ENST00000456506 AUTS2Q8WXX7 1259 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 BRF1Q92994 677 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 MBOAT7Q96N66 472 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 RNF26Q9BY78 433 aaPredicted RBP13.42□□□□□ -0.26
LMCD1-206ENST00000456506 NRDE2Q9H7Z3 1164 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 NRBP2Q9NSY0 501 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 NR2E1Q9Y466 385 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 SAMM50Q9Y512 469 aa13.42□□□□□ -0.26
LMCD1-206ENST00000456506 PATJQ8NI35 1801 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 CYP3A7-CYP3A51PA0A087WV96 503 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 CCDC196A0A1B0GTZ2 297 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 H0Y858 1186 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 ZNF623O75123 536 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 CTSAP10619 480 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 CYP3A7P24462 503 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 SFNP31947 248 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 MTHFRP42898 656 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 MTMR3Q13615 1198 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 NPY5RQ15761 445 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 DDX53Q86TM3 631 aaKnown RBP13.41□□□□□ -0.26
LMCD1-206ENST00000456506 RNF169Q8NCN4 708 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 LPPQ93052 612 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 IGSF21Q96ID5 467 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 CCDC136Q96JN2 1154 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 MRPL9Q9BYD2 267 aaKnown RBP13.41□□□□□ -0.26
LMCD1-206ENST00000456506 CHST12Q9NRB3 414 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 TBC1D13Q9NVG8 400 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 DACT1Q9NYF0 836 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 VPS54Q9P1Q0 977 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 SNX14Q9Y5W7 946 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 ZNF292O60281 2723 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 MIA3Q5JRA6 1907 aa13.41□□□□□ -0.26
LMCD1-206ENST00000456506 DNAH14Q0VDD8 3507 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 A0A087WZ62 844 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 GAS7O60861 476 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 OFD1O75665 1012 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 CXCL14O95715 111 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 ASGR2P07307 311 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 GALTP07902 379 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 IFNAR1P17181 557 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 HSPA4P34932 840 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 JAK3P52333 1124 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 POLGP54098 1239 aaPredicted RBP13.4□□□□□ -0.26
LMCD1-206ENST00000456506 TBC1D8BQ0IIM8 1120 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 Q4G0T1 1027 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 RARS2Q5T160 578 aaKnown RBP13.4□□□□□ -0.26
LMCD1-206ENST00000456506 LRCH2Q5VUJ6 765 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 CES5AQ6NT32 575 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 ANO5Q75V66 913 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 ASCL5Q7RTU5 278 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 VPS52Q8N1B4 723 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 RDM1Q8NG50 284 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 ETNPPLQ8TBG4 499 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 NLRP7Q8WX94 980 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 SH2D3AQ9BRG2 576 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 FDXACB1Q9BRP7 624 aaPredicted RBP13.4□□□□□ -0.26
LMCD1-206ENST00000456506 TSHZ2Q9NRE2 1034 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 DNAJB4Q9UDY4 337 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 USTQ9Y2C2 406 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 VWA8A3KMH1 1905 aa13.4□□□□□ -0.26
LMCD1-206ENST00000456506 TRIP11Q15643 1979 aa13.4□□□□□ -0.27
LMCD1-206ENST00000456506 WDR87Q6ZQQ6 2873 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms