RNA–Protein interactions for RNA: ENST00000455906.1

COL20A1-204, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-204ENST00000455906 ANKRD54Q6NXT1 300 aa21.07■□□□□ 0.96
COL20A1-204ENST00000455906 SLC39A11Q8N1S5 342 aa21.07■□□□□ 0.96
COL20A1-204ENST00000455906 HELQQ8TDG4 1101 aa21.07■□□□□ 0.96
COL20A1-204ENST00000455906 TM6SF1Q9BZW5 370 aa21.07■□□□□ 0.96
COL20A1-204ENST00000455906 SPG21Q9NZD8 308 aa21.07■□□□□ 0.96
COL20A1-204ENST00000455906 CPLX1O14810 134 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 TECP42680 631 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 KRT17Q04695 432 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 SYCE2Q6PIF2 218 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 TRIM67Q6ZTA4 783 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 FAM177A1Q8N128 213 aaPredicted RBP21.06■□□□□ 0.96
COL20A1-204ENST00000455906 RPGRIP1Q96KN7 1286 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 MFSD14AQ96MC6 490 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 TRAIPQ9BWF2 469 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 GCOM2Q9BZD3 368 aaPredicted RBP21.06■□□□□ 0.96
COL20A1-204ENST00000455906 CHST12Q9NRB3 414 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 DACT1Q9NYF0 836 aa21.06■□□□□ 0.96
COL20A1-204ENST00000455906 A0A087WZ62 844 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 SLC37A4O43826 429 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 MAFO75444 373 aaPredicted RBP21.05■□□□□ 0.96
COL20A1-204ENST00000455906 ZXDAP98168 799 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 CDC42EP1Q00587 391 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 NHLH1Q02575 133 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 STK3Q13188 491 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 NONOQ15233 471 aaKnown RBP eCLIP21.05■□□□□ 0.96
COL20A1-204ENST00000455906 INF2Q27J81 1249 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 GALNT17Q6IS24 598 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 LLGL2Q6P1M3 1020 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 ANO5Q75V66 913 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 TMC7Q7Z402 723 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 BMP8AQ7Z5Y6 402 aa21.05■□□□□ 0.96
COL20A1-204ENST00000455906 FDXACB1Q9BRP7 624 aaPredicted RBP21.05■□□□□ 0.96
COL20A1-204ENST00000455906 DDX25Q9UHL0 483 aaKnown RBP21.05■□□□□ 0.96
COL20A1-204ENST00000455906 TMEM221A6NGB7 291 aa21.04■□□□□ 0.96
COL20A1-204ENST00000455906 M0R296 226 aa21.04■□□□□ 0.96
COL20A1-204ENST00000455906 EML1O00423 815 aa21.04■□□□□ 0.96
COL20A1-204ENST00000455906 SRGAP2BP0DMP2 458 aa21.04■□□□□ 0.96
COL20A1-204ENST00000455906 PHKA2P46019 1235 aa21.04■□□□□ 0.96
COL20A1-204ENST00000455906 ALYREFQ86V81 257 aaKnown RBP21.04■□□□□ 0.96
COL20A1-204ENST00000455906 ZNF410Q86VK4 478 aa21.04■□□□□ 0.96
COL20A1-204ENST00000455906 MRPL43Q8N983 215 aaKnown RBP21.04■□□□□ 0.96
COL20A1-204ENST00000455906 MRPL9Q9BYD2 267 aaKnown RBP21.04■□□□□ 0.96
COL20A1-204ENST00000455906 SUCLA2Q9P2R7 463 aaPredicted RBP21.04■□□□□ 0.96
COL20A1-204ENST00000455906 KCNJ14Q9UNX9 436 aa21.04■□□□□ 0.96
COL20A1-204ENST00000455906 C2orf71A6NGG8 1288 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 DDX11L8A8MPP1 907 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 NT5C1B-RDH14C9J2C7 533 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 DNM2P50570 870 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 BCAR1P56945 870 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 PSMC5P62195 406 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 KRT25Q7Z3Z0 450 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 RHPN2Q8IUC4 686 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 KSR1Q8IVT5 923 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 APOL5Q9BWW9 433 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 KCNMB3Q9NPA1 279 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 VAV3Q9UKW4 847 aa21.03■□□□□ 0.96
COL20A1-204ENST00000455906 HOXB8P17481 243 aaPredicted RBP21.02■□□□□ 0.96
COL20A1-204ENST00000455906 SFPQP23246 707 aaKnown RBP eCLIP21.02■□□□□ 0.96
COL20A1-204ENST00000455906 PPP2R5CQ13362 524 aa21.02■□□□□ 0.96
COL20A1-204ENST00000455906 SMC1AQ14683 1233 aaKnown RBP21.02■□□□□ 0.96
COL20A1-204ENST00000455906 LETM2Q2VYF4 491 aa21.02■□□□□ 0.96
COL20A1-204ENST00000455906 PLA2G4FQ68DD2 849 aa21.02■□□□□ 0.96
COL20A1-204ENST00000455906 CPLX2Q6PUV4 134 aaKnown RBP21.02■□□□□ 0.96
COL20A1-204ENST00000455906 TMEM173Q86WV6 379 aaPredicted RBP21.02■□□□□ 0.96
COL20A1-204ENST00000455906 LPPQ93052 612 aa21.02■□□□□ 0.96
COL20A1-204ENST00000455906 PHF20Q9BVI0 1012 aa21.02■□□□□ 0.96
COL20A1-204ENST00000455906 CDH22Q9UJ99 828 aa21.02■□□□□ 0.96
COL20A1-204ENST00000455906 HCFC2Q9Y5Z7 792 aa21.02■□□□□ 0.96
COL20A1-204ENST00000455906 KMT2EQ8IZD2 1858 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 MEIS3P2A8K0S8 358 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 ALDH7A1P49419 539 aaKnown RBP21.01■□□□□ 0.95
COL20A1-204ENST00000455906 SCRN1Q12765 414 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 TWF2Q6IBS0 349 aaKnown RBP21.01■□□□□ 0.95
COL20A1-204ENST00000455906 PBXIP1Q96AQ6 731 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 NLRP4Q96MN2 994 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 INO80BQ9C086 356 aaPredicted RBP21.01■□□□□ 0.95
COL20A1-204ENST00000455906 IFT122Q9HBG6 1241 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 CYP26B1Q9NR63 512 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 PDRG1Q9NUG6 133 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 FAM105AQ9NUU6 356 aa21.01■□□□□ 0.95
COL20A1-204ENST00000455906 WRAP73Q9P2S5 460 aaPredicted RBP21.01■□□□□ 0.95
COL20A1-204ENST00000455906 PIN4Q9Y237 131 aaKnown RBP21.01■□□□□ 0.95
COL20A1-204ENST00000455906 USP34Q70CQ2 3546 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 CLASP2O75122 1294 aaKnown RBP21■□□□□ 0.95
COL20A1-204ENST00000455906 CENPBP07199 599 aaPredicted RBP21■□□□□ 0.95
COL20A1-204ENST00000455906 QARSP47897 775 aaKnown RBP21■□□□□ 0.95
COL20A1-204ENST00000455906 NPEPPSP55786 919 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 LONRF3Q496Y0 759 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 PPP4R3AQ6IN85 833 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 ZNF579Q8NAF0 562 aaKnown RBP21■□□□□ 0.95
COL20A1-204ENST00000455906 RSPH1Q8WYR4 309 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 CASP10Q92851 521 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 TMEM169Q96HH4 297 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 FAM20AQ96MK3 541 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 ZBP1Q9H171 429 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 GJB4Q9NTQ9 266 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 TBC1D13Q9NVG8 400 aa21■□□□□ 0.95
COL20A1-204ENST00000455906 ZNF623O75123 536 aa20.99■□□□□ 0.95
COL20A1-204ENST00000455906 ZC3H11AO75152 810 aaKnown RBP eCLIP20.99■□□□□ 0.95
COL20A1-204ENST00000455906 SKIP12755 728 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms