RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 HELQQ8TDG4 1101 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 TMEM143Q96AN5 459 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 CEP170P1Q96L14 293 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 DHX33Q9H6R0 707 aaKnown RBP13.37□□□□□ -0.27
PDGFB-204ENST00000455790 BRMS1Q9HCU9 246 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 PCDHB12Q9Y5F1 795 aa13.37□□□□□ -0.27
PDGFB-204ENST00000455790 A0A0U1RQF3 1178 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 MEIS3P2A8K0S8 358 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 NCK2O43639 380 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 MARCH6O60337 910 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 LAG3P18627 525 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 COL9A1P20849 921 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 SFPQP23246 707 aaKnown RBP eCLIP13.36□□□□□ -0.27
PDGFB-204ENST00000455790 YWHABP31946 246 aaKnown RBP13.36□□□□□ -0.27
PDGFB-204ENST00000455790 SSTR3P32745 418 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-204ENST00000455790 DNM2P50570 870 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 POLGP54098 1239 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-204ENST00000455790 ERVFC1P60507 584 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 ZP2Q05996 745 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 ADAM15Q13444 863 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 LONRF3Q496Y0 759 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 C8orf34Q49A92 452 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 ZNF410Q86VK4 478 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 CCDC83Q8IWF9 413 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 C4orf19Q8IY42 314 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 GJD3Q8N144 294 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 LRRC43Q8N309 656 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 VN1R2Q8NFZ6 395 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 LPPQ93052 612 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 KIF2CQ99661 725 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 NAP1L4Q99733 375 aaKnown RBP13.36□□□□□ -0.27
PDGFB-204ENST00000455790 MINDY3Q9H8M7 445 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 IFT122Q9HBG6 1241 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 C11orf16Q9NQ32 467 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 TLR9Q9NR96 1032 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 AAASQ9NRG9 546 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 RNF216Q9NWF9 866 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-204ENST00000455790 CLEC1BQ9P126 229 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 BARX2Q9UMQ3 279 aaPredicted RBP13.36□□□□□ -0.27
PDGFB-204ENST00000455790 PIN4Q9Y237 131 aaKnown RBP13.36□□□□□ -0.27
PDGFB-204ENST00000455790 COL4A3BPQ9Y5P4 624 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 ARID2Q68CP9 1835 aa13.36□□□□□ -0.27
PDGFB-204ENST00000455790 FAM86C2PA6NEL3 165 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 FSCN2O14926 492 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 PER2O15055 1255 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 HOXA2O43364 376 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 MBTPS2O43462 519 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 PHKA2P46019 1235 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 NDUFV1P49821 464 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 EMC2Q15006 297 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 CALCRLQ16602 461 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 PUS10Q3MIT2 529 aaKnown RBP13.35□□□□□ -0.27
PDGFB-204ENST00000455790 PLPP4Q5VZY2 271 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 TWF2Q6IBS0 349 aaKnown RBP13.35□□□□□ -0.27
PDGFB-204ENST00000455790 KCNT2Q6UVM3 1135 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 TPH2Q8IWU9 490 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 SLFN12Q8IYM2 578 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 ABI1Q8IZP0 508 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 EFHBQ8N7U6 833 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
PDGFB-204ENST00000455790 SLC7A3Q8WY07 619 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 MSLNLQ96KJ4 702 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 EIF2AK1Q9BQI3 630 aaKnown RBP13.35□□□□□ -0.27
PDGFB-204ENST00000455790 TMEM60Q9H2L4 133 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 ZSWIM4Q9H7M6 989 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 XPNPEP1Q9NQW7 623 aa13.35□□□□□ -0.27
PDGFB-204ENST00000455790 NEMFO60524 1076 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 DKC1O60832 514 aaKnown RBP eCLIP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 SLITRK3O94933 977 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 BAG4O95429 457 aaKnown RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 CENPBP07199 599 aaPredicted RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 SRGAP2CP0DJJ0 459 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 RFC5P40937 340 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 CDC42EP1Q00587 391 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 UBE3AQ05086 875 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 LAMTOR4Q0VGL1 99 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 TRIM29Q14134 588 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 SMAD2Q15796 467 aaKnown RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 XKR9Q5GH70 373 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 CATSPER4Q7RTX7 472 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 TMEM173Q86WV6 379 aaPredicted RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 MICAL1Q8TDZ2 1067 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 PSPC1Q8WXF1 523 aaKnown RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 MRPS27Q92552 414 aaKnown RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 PPP2R3CQ969Q6 453 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 ZNF558Q96NG5 402 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 MTMR9Q96QG7 549 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 JPH2Q9BR39 696 aaPredicted RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 TTC12Q9H892 705 aaPredicted RBP13.34□□□□□ -0.27
PDGFB-204ENST00000455790 CHST12Q9NRB3 414 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 DACT1Q9NYF0 836 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 CD207Q9UJ71 328 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 LIMCH1Q9UPQ0 1083 aa13.34□□□□□ -0.27
PDGFB-204ENST00000455790 TRIOO75962 3097 aa13.33□□□□□ -0.27
PDGFB-204ENST00000455790 A0A087WWV3 80 aa13.33□□□□□ -0.28
PDGFB-204ENST00000455790 POTEMA6NI47 508 aa13.33□□□□□ -0.28
PDGFB-204ENST00000455790 HIDE1A8MVS5 230 aa13.33□□□□□ -0.28
PDGFB-204ENST00000455790 B4GALT3O60512 393 aa13.33□□□□□ -0.28
PDGFB-204ENST00000455790 EOMESO95936 686 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms