RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 TRIM43Q96BQ3 446 aaPredicted RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 EDC3Q96F86 508 aaKnown RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 ASB2Q96Q27 587 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 APBA2Q99767 749 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 HDAC8Q9BY41 377 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 PRKRIP1Q9H875 184 aaPredicted RBP4.57□□□□□ -1.68
RBM39-220ENST00000455343 PDLIM7Q9NR12 457 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 FLRT1Q9NZU1 646 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 GPR160Q9UJ42 338 aa4.57□□□□□ -1.68
RBM39-220ENST00000455343 SPEF2Q9C093 1822 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 A0A1B0GUL6 1792 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 PDS5AQ29RF7 1337 aaKnown RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 BDP1A6H8Y1 2624 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 DDX60LQ5H9U9 1706 aaKnown RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 MYOCOSA0A1B0GUC4 107 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 SLC22A31A6NKX4 558 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 C19orf81C9J6K1 198 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 SEMA7AO75326 666 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 CNMDO75829 334 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 MAP4K4O95819 1239 aaPredicted RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 CYBAP13498 195 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 SLC5A1P13866 664 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 ERCC3P19447 782 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 ZEB1P37275 1124 aaPredicted RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 BTDP43251 543 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 EPHB4P54760 987 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 CHMP4BP1P59074 171 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 IRX3P78415 501 aaPredicted RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 EXOSC9Q06265 439 aaKnown RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 ARSHQ5FYA8 562 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 AKNAD1Q5T1N1 836 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 FBXL19Q6PCT2 694 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 RNF111Q6ZNA4 994 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 PLEKHH3Q7Z736 793 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 ZNF605Q86T29 641 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 ZGPATQ8N5A5 531 aaKnown RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 TRPV1Q8NER1 839 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 LINC01599Q8WXQ3 324 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 USP44Q9H0E7 712 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.56□□□□□ -1.68
RBM39-220ENST00000455343 AS3MTQ9HBK9 375 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 COPRSQ9NQ92 184 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 GMIPQ9P107 970 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 HERC5Q9UII4 1024 aaKnown RBP4.56□□□□□ -1.68
RBM39-220ENST00000455343 DENND2AQ9ULE3 1009 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 RABGAP1Q9Y3P9 1069 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 CHD7Q9P2D1 2997 aa4.56□□□□□ -1.68
RBM39-220ENST00000455343 MROH7-TTC4A0A0A0MT08 1334 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 SLC15A5A6NIM6 579 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 NOTOA8MTQ0 251 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 KIAA0355O15063 1070 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 NUAK1O60285 661 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 PSPNO60542 156 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 CIAO1O76071 339 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 ATE1O95260 518 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 ASNSP08243 561 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 RAG1P15918 1043 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 PHKA1P46020 1223 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 DDX10Q13206 875 aaKnown RBP4.55□□□□□ -1.68
RBM39-220ENST00000455343 PICALMQ13492 652 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 GRB14Q14449 540 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 TRIM60Q495X7 471 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 GJC2Q5T442 439 aaPredicted RBP4.55□□□□□ -1.68
RBM39-220ENST00000455343 MFSD14CQ5VZR4 134 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 OVOS1Q6IE37 1185 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 SLC4A10Q6U841 1118 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 LBX2Q6XYB7 198 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 TTLL10Q6ZVT0 673 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 WDR63Q8IWG1 891 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 DAGLBQ8NCG7 672 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 ARRDC4Q8NCT1 418 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 NPLOC4Q8TAT6 608 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 C12orf42Q96LP6 360 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 UHRF1Q96T88 793 aaPredicted RBP4.55□□□□□ -1.68
RBM39-220ENST00000455343 C1QTNF1Q9BXJ1 281 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 ZNF552Q9H707 407 aaPredicted RBP4.55□□□□□ -1.68
RBM39-220ENST00000455343 DNAJC18Q9H819 358 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 BRMS1Q9HCU9 246 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 GINM1Q9NU53 330 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 GNL3LQ9NVN8 582 aaKnown RBP4.55□□□□□ -1.68
RBM39-220ENST00000455343 THEGQ9P2T0 379 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 ATP11BQ9Y2G3 1177 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 SUPT16HQ9Y5B9 1047 aaKnown RBP4.55□□□□□ -1.68
RBM39-220ENST00000455343 PCDHB14Q9Y5E9 798 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 PIEZO1Q92508 2521 aa4.55□□□□□ -1.68
RBM39-220ENST00000455343 SEPT4O43236 478 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 GREM1O60565 184 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 GLRX3O76003 335 aaKnown RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 EFEMP2O95967 443 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 RPL10P27635 214 aaKnown RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 CYP2C19P33261 490 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 EIF4A3P38919 411 aaKnown RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 GALK1P51570 392 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 DLG4P78352 724 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 CCNA1P78396 465 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 MRPS5P82675 430 aaKnown RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 MECOMQ03112 1051 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 TLE2Q04725 743 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms