RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 DTHD1Q6ZMT9 781 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 CATSPER3Q86XQ3 398 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 ZNF579Q8NAF0 562 aaKnown RBP19.74■□□□□ 0.75
COPS7A-202ENST00000455113 FBXO22Q8NEZ5 403 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 TMEM143Q96AN5 459 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 DACT1Q9NYF0 836 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 COL6A3P12111 3177 aa19.74■□□□□ 0.75
COPS7A-202ENST00000455113 RFXAPO00287 272 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 MUTP22033 750 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 MXD4Q14582 209 aaPredicted RBP19.73■□□□□ 0.75
COPS7A-202ENST00000455113 SF3A1Q15459 793 aaKnown RBP19.73■□□□□ 0.75
COPS7A-202ENST00000455113 MICALL1Q8N3F8 863 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 PIGOQ8TEQ8 1089 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 GDPD2Q9HCC8 539 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.73■□□□□ 0.75
COPS7A-202ENST00000455113 ARID2Q68CP9 1835 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 MGEA5O60502 916 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 PRPHP41219 470 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 RARRES1P49788 294 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 PRPF31Q8WWY3 499 aaKnown RBP19.73■□□□□ 0.75
COPS7A-202ENST00000455113 C17orf80Q9BSJ5 609 aa19.73■□□□□ 0.75
COPS7A-202ENST00000455113 SCAND2PQ9GZW5 306 aaPredicted RBP19.73■□□□□ 0.75
COPS7A-202ENST00000455113 MED24O75448 989 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 SRGAP2CP0DJJ0 459 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 SPATA31C1P0DKV0 1188 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 CCT6AP40227 531 aaKnown RBP19.72■□□□□ 0.75
COPS7A-202ENST00000455113 NASPP49321 788 aaPredicted RBP19.72■□□□□ 0.75
COPS7A-202ENST00000455113 TFDP1Q14186 410 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 KRT79Q5XKE5 535 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 CATSPER4Q7RTX7 472 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 KSR1Q8IVT5 923 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 TMEM192Q8IY95 271 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 C4orf32Q8N8J7 132 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 ZNF689Q96CS4 500 aaPredicted RBP19.72■□□□□ 0.75
COPS7A-202ENST00000455113 CHST12Q9NRB3 414 aa19.72■□□□□ 0.75
COPS7A-202ENST00000455113 COL4A6Q14031 1691 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 EPOPA6NHQ4 379 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 C9IYK1 514 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 FGFR4P22455 802 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 LAMTOR4Q0VGL1 99 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 GRB10Q13322 594 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 CCDC85BQ15834 202 aaPredicted RBP19.71■□□□□ 0.75
COPS7A-202ENST00000455113 EPC2Q52LR7 807 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 SPRED2Q7Z698 418 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 SRGAP1Q7Z6B7 1085 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 CMTR2Q8IYT2 770 aaKnown RBP19.71■□□□□ 0.75
COPS7A-202ENST00000455113 GDPD5Q8WTR4 605 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 SPATA32Q96LK8 384 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 ELAC1Q9H777 363 aaKnown RBP19.71■□□□□ 0.75
COPS7A-202ENST00000455113 TMEM161AQ9NX61 479 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 LMCD1Q9NZU5 365 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 DBR1Q9UK59 544 aaKnown RBP19.71■□□□□ 0.75
COPS7A-202ENST00000455113 HOXA2O43364 376 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 USO1O60763 962 aaKnown RBP19.71■□□□□ 0.75
COPS7A-202ENST00000455113 CSDE1O75534 798 aaKnown RBP19.71■□□□□ 0.75
COPS7A-202ENST00000455113 YEATS4O95619 227 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 CTNNB1P35222 781 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 ABI1Q8IZP0 508 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 RNF149Q8NC42 400 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 LINC00301Q8NCQ3 95 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 SNX29Q8TEQ0 813 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 LEO1Q8WVC0 666 aaPredicted RBP19.71■□□□□ 0.75
COPS7A-202ENST00000455113 RCOR1Q9UKL0 485 aa19.71■□□□□ 0.75
COPS7A-202ENST00000455113 NLRC5Q86WI3 1866 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 ARHGEF35A5YM69 484 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 POU3F3P20264 500 aaPredicted RBP19.7■□□□□ 0.74
COPS7A-202ENST00000455113 PHKA2P46019 1235 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 NCBP1Q09161 790 aaKnown RBP19.7■□□□□ 0.74
COPS7A-202ENST00000455113 DSC3Q14574 896 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 SLC39A14Q15043 492 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 STK38Q15208 465 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 PTPAQ15257 358 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 PTPROQ16827 1216 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 PAN2Q504Q3 1202 aaKnown RBP19.7■□□□□ 0.74
COPS7A-202ENST00000455113 TWF2Q6IBS0 349 aaKnown RBP19.7■□□□□ 0.74
COPS7A-202ENST00000455113 POTEGQ6S5H5 508 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 IGSF22Q8N9C0 903 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 MCPH1Q8NEM0 835 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 RC3H2Q9HBD1 1191 aaKnown RBP19.7■□□□□ 0.74
COPS7A-202ENST00000455113 PIN4Q9Y237 131 aaKnown RBP19.7■□□□□ 0.74
COPS7A-202ENST00000455113 MTCH2Q9Y6C9 303 aa19.7■□□□□ 0.74
COPS7A-202ENST00000455113 RALGAPA2Q2PPJ7 1873 aa19.69■□□□□ 0.74
COPS7A-202ENST00000455113 BMP15O95972 392 aa19.69■□□□□ 0.74
COPS7A-202ENST00000455113 RB1P06400 928 aa19.69■□□□□ 0.74
COPS7A-202ENST00000455113 SKIP12755 728 aa19.69■□□□□ 0.74
COPS7A-202ENST00000455113 ATP2C1P98194 919 aaPredicted RBP19.69■□□□□ 0.74
COPS7A-202ENST00000455113 SKIV2LQ15477 1246 aaKnown RBP19.69■□□□□ 0.74
COPS7A-202ENST00000455113 SPOUT1Q5T280 376 aaKnown RBP19.69■□□□□ 0.74
COPS7A-202ENST00000455113 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.69■□□□□ 0.74
COPS7A-202ENST00000455113 CRIPAKQ8N1N5 446 aa19.69■□□□□ 0.74
COPS7A-202ENST00000455113 C11orf84Q9BUA3 381 aaPredicted RBP19.69■□□□□ 0.74
COPS7A-202ENST00000455113 IFT122Q9HBG6 1241 aa19.69■□□□□ 0.74
COPS7A-202ENST00000455113 CHD9Q3L8U1 2897 aa19.69■□□□□ 0.74
COPS7A-202ENST00000455113 A0A087WWV3 80 aa19.68■□□□□ 0.74
COPS7A-202ENST00000455113 TBKBP1A7MCY6 615 aa19.68■□□□□ 0.74
COPS7A-202ENST00000455113 ERLIN2O94905 339 aa19.68■□□□□ 0.74
COPS7A-202ENST00000455113 MCM4P33991 863 aa19.68■□□□□ 0.74
COPS7A-202ENST00000455113 GPM6BQ13491 265 aa19.68■□□□□ 0.74
COPS7A-202ENST00000455113 PCBP1Q15365 356 aaKnown RBP eCLIP19.68■□□□□ 0.74
COPS7A-202ENST00000455113 ARL6IP4Q66PJ3 421 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms