RNA–Protein interactions for RNA: ENST00000454704.5

GTF3C2-206, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 1 (best)

Gene GTF3C2, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-206ENST00000454704 ARFGAP2Q8N6H7 521 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 USP38Q8NB14 1042 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 RAET1EQ8TD07 263 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 TMEM174Q8WUU8 243 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 LRRC45Q96CN5 670 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 SLITRK6Q9H5Y7 841 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 RNF216Q9NWF9 866 aaPredicted RBP11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 FAM198AQ9UFP1 575 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 DMGDHQ9UI17 866 aaKnown RBP11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 HERC5Q9UII4 1024 aaKnown RBP11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 ZNF112Q9UJU3 913 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 ODF2LQ9ULJ1 636 aa11.52□□□□□ -0.56
GTF3C2-206ENST00000454704 MYPNQ86TC9 1320 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 MGAMO43451 1857 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 A0A087X0T9 212 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L15C9J2P7 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L13C9JLJ4 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L11C9JVI0 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L18D6R9N7 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L22D6RA61 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L17D6RBQ6 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L19D6RCP7 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L20D6RJB6 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 F5H6K3 240 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 MYO1CO00159 1063 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 NKRFO15226 690 aaKnown RBP eCLIP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 HEXIM1O94992 359 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 KIF4AO95239 1232 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 NR3C1P04150 777 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 FAM228BP0C875 321 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 SPATA31C1P0DKV0 1188 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 MYBP10242 640 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 MYBL2P10244 700 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 PSMC2P35998 433 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 STAT1P42224 750 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 JAM2P57087 298 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 SETQ01105 290 aaPredicted RBP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 ATP2B2Q01814 1243 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 KLRC3Q07444 240 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L24Q0WX57 530 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 MTMR3Q13615 1198 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 EPHA7Q15375 998 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 ABCB5Q2M3G0 1257 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 NOL9Q5SY16 702 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 CFAP58Q5T655 872 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 USP17L6PQ6QN14 398 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 IRF2BP2Q7Z5L9 587 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 SLFN11Q7Z7L1 901 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 SFR1Q86XK3 245 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 ZFPM1Q8IX07 1006 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 FAM133AQ8N9E0 248 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 GLIS3Q8NEA6 775 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 LENG9Q96B70 501 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 DRC1Q96MC2 740 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 PARK7Q99497 189 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 REEP2Q9BRK0 252 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 CAPS2Q9BXY5 557 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 WDR11Q9BZH6 1224 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 ISCUQ9H1K1 167 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 DNAJC18Q9H819 358 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 RBM12Q9NTZ6 932 aaKnown RBP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 SUCLA2Q9P2R7 463 aaPredicted RBP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 SALL4Q9UJQ4 1053 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 VAV3Q9UKW4 847 aa11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 TTC7AQ9ULT0 858 aaPredicted RBP11.52□□□□□ -0.57
GTF3C2-206ENST00000454704 NCANO14594 1321 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 FRMPD4Q14CM0 1322 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 HMGB1P1B2RPK0 211 aaPredicted RBP11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 BHMG1C9JSJ3 638 aaPredicted RBP11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 PGRMC1O00264 195 aaKnown RBP11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 BUB1O43683 1085 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 PHACTR2O75167 634 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 H2AFZP0C0S5 128 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 CYP2C8P10632 490 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 MAPTP10636 758 aaKnown RBP11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 PON1P27169 355 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 HSPA9P38646 679 aaKnown RBP11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 SNRPFP62306 86 aaKnown RBP11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 IRX5P78411 483 aaPredicted RBP11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 PPP2R5CQ13362 524 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 PRR16Q569H4 304 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 DPY19L2P1Q6NXN4 242 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 POTEGQ6S5H5 508 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 POTEEQ6S8J3 1075 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 H2AFVQ71UI9 128 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 SLC9A9Q8IVB4 645 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 EFCAB13Q8IY85 973 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 RASGEF1CQ8N431 466 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 SCFD2Q8WU76 684 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 NAP1L3Q99457 506 aaPredicted RBP11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 ARHGEF10LQ9HCE6 1279 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 NAGPAQ9UK23 515 aa11.51□□□□□ -0.57
GTF3C2-206ENST00000454704 ASTN1O14525 1302 aa11.5□□□□□ -0.57
GTF3C2-206ENST00000454704 EIF3HO15372 352 aaKnown RBP eCLIP11.5□□□□□ -0.57
GTF3C2-206ENST00000454704 MSH4O15457 936 aa11.5□□□□□ -0.57
GTF3C2-206ENST00000454704 P4HA2O15460 535 aa11.5□□□□□ -0.57
GTF3C2-206ENST00000454704 FAM13AO94988 1023 aa11.5□□□□□ -0.57
GTF3C2-206ENST00000454704 NDUFB10O96000 172 aa11.5□□□□□ -0.57
GTF3C2-206ENST00000454704 HOXD10P28358 340 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms