RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 LRRC55Q6ZSA7 311 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 ZNF598Q86UK7 904 aaKnown RBP20.52■□□□□ 0.88
SEC22C-212ENST00000454141 POTEDQ86YR6 584 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 RHPN2Q8IUC4 686 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 NECAB1Q8N987 351 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 HAS1Q92839 578 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 GTF3C6Q969F1 213 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 FDXACB1Q9BRP7 624 aaPredicted RBP20.52■□□□□ 0.88
SEC22C-212ENST00000454141 TLE6Q9H808 572 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 BRMS1Q9HCU9 246 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 CYP26B1Q9NR63 512 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 LZTS1Q9Y250 596 aa20.52■□□□□ 0.88
SEC22C-212ENST00000454141 C5orf42Q9H799 3197 aa20.52■□□□□ 0.87
SEC22C-212ENST00000454141 FAM86C2PA6NEL3 165 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 C19orf67A6NJJ6 358 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 MARCH6O60337 910 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 GLP2RO95838 553 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 EOMESO95936 686 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 FDPSP14324 419 aaKnown RBP20.51■□□□□ 0.87
SEC22C-212ENST00000454141 ATF7P17544 494 aaPredicted RBP20.51■□□□□ 0.87
SEC22C-212ENST00000454141 PPM1AP35813 382 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 KRT2P35908 639 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 ERVFC1P60507 584 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 PLCB3Q01970 1234 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 NR5A1Q13285 461 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 ME3Q16798 604 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 PDE12Q6L8Q7 609 aaKnown RBP20.51■□□□□ 0.87
SEC22C-212ENST00000454141 KCNT2Q6UVM3 1135 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 SLC7A3Q8WY07 619 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 MRPS27Q92552 414 aaKnown RBP20.51■□□□□ 0.87
SEC22C-212ENST00000454141 NLRP4Q96MN2 994 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 ZNF558Q96NG5 402 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 POP1Q99575 1024 aaKnown RBP20.51■□□□□ 0.87
SEC22C-212ENST00000454141 INO80BQ9C086 356 aaPredicted RBP20.51■□□□□ 0.87
SEC22C-212ENST00000454141 CHST12Q9NRB3 414 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 CLEC1BQ9P126 229 aa20.51■□□□□ 0.87
SEC22C-212ENST00000454141 WRAP73Q9P2S5 460 aaPredicted RBP20.51■□□□□ 0.87
SEC22C-212ENST00000454141 FSD2A1L4K1 749 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 FAM205CA6NFA0 338 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 FSCN2O14926 492 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 EYA4O95677 639 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 ALADP13716 330 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 PBX3P40426 434 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 NPEPPSP55786 919 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 EPHA7Q15375 998 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 SMRP1Q8NCR6 262 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 HELQQ8TDG4 1101 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 CEP170P1Q96L14 293 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 CDCA3Q99618 268 aaPredicted RBP20.5■□□□□ 0.87
SEC22C-212ENST00000454141 LXNQ9BS40 222 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 PUF60Q9UHX1 559 aaKnown RBP20.5■□□□□ 0.87
SEC22C-212ENST00000454141 BARX2Q9UMQ3 279 aaPredicted RBP20.5■□□□□ 0.87
SEC22C-212ENST00000454141 PIN4Q9Y237 131 aaKnown RBP20.5■□□□□ 0.87
SEC22C-212ENST00000454141 PPME1Q9Y570 386 aa20.5■□□□□ 0.87
SEC22C-212ENST00000454141 EIF5BO60841 1220 aaKnown RBP20.49■□□□□ 0.87
SEC22C-212ENST00000454141 PHKA2P46019 1235 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 POLGP54098 1239 aaPredicted RBP20.49■□□□□ 0.87
SEC22C-212ENST00000454141 COASYQ13057 564 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 DUSP6Q16828 381 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 PLPP4Q5VZY2 271 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 TWF2Q6IBS0 349 aaKnown RBP20.49■□□□□ 0.87
SEC22C-212ENST00000454141 NCAPH2Q6IBW4 605 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 KSR1Q8IVT5 923 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 EXOC8Q8IYI6 725 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 SLFN12Q8IYM2 578 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 NSUN7Q8NE18 718 aaKnown RBP20.49■□□□□ 0.87
SEC22C-212ENST00000454141 TNFRSF25Q93038 417 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 TRAIPQ9BWF2 469 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 MRPL9Q9BYD2 267 aaKnown RBP20.49■□□□□ 0.87
SEC22C-212ENST00000454141 COL4A3BPQ9Y5P4 624 aa20.49■□□□□ 0.87
SEC22C-212ENST00000454141 PER2O15055 1255 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 DCXO43602 365 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 BAG4O95429 457 aaKnown RBP20.48■□□□□ 0.87
SEC22C-212ENST00000454141 RFC5P40937 340 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 NEK4P51957 841 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 SPIRE1Q08AE8 756 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 CATSPER4Q7RTX7 472 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 C4orf19Q8IY42 314 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 ZNF579Q8NAF0 562 aaKnown RBP20.48■□□□□ 0.87
SEC22C-212ENST00000454141 RSPH1Q8WYR4 309 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 TCF25Q9BQ70 676 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 DHX33Q9H6R0 707 aaKnown RBP20.48■□□□□ 0.87
SEC22C-212ENST00000454141 ENTPD7Q9NQZ7 604 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 SPG21Q9NZD8 308 aa20.48■□□□□ 0.87
SEC22C-212ENST00000454141 SKIP12755 728 aa20.47■□□□□ 0.87
SEC22C-212ENST00000454141 YWHABP31946 246 aaKnown RBP20.47■□□□□ 0.87
SEC22C-212ENST00000454141 KRT17Q04695 432 aa20.47■□□□□ 0.87
SEC22C-212ENST00000454141 PSPC1Q8WXF1 523 aaKnown RBP20.47■□□□□ 0.87
SEC22C-212ENST00000454141 DYDC2Q96IM9 177 aa20.47■□□□□ 0.87
SEC22C-212ENST00000454141 ZSWIM4Q9H7M6 989 aa20.47■□□□□ 0.87
SEC22C-212ENST00000454141 IFT122Q9HBG6 1241 aa20.47■□□□□ 0.87
SEC22C-212ENST00000454141 NGRNQ9NPE2 291 aaKnown RBP20.47■□□□□ 0.87
SEC22C-212ENST00000454141 RGL1Q9NZL6 768 aa20.47■□□□□ 0.87
SEC22C-212ENST00000454141 HCN4Q9Y3Q4 1203 aa20.47■□□□□ 0.87
SEC22C-212ENST00000454141 PRR33A8MZF0 331 aa20.46■□□□□ 0.87
SEC22C-212ENST00000454141 GAS2O43903 313 aaKnown RBP20.46■□□□□ 0.87
SEC22C-212ENST00000454141 JAK2O60674 1132 aa20.46■□□□□ 0.87
SEC22C-212ENST00000454141 RAB27AP51159 221 aa20.46■□□□□ 0.87
SEC22C-212ENST00000454141 RBM10P98175 930 aaKnown RBP20.46■□□□□ 0.87
SEC22C-212ENST00000454141 CYP4A11Q02928 519 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms