RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 ZSCAN26Q16670 478 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 MTERF2Q49AM1 385 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 EXOC8Q8IYI6 725 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 MCPH1Q8NEM0 835 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 PXYLP1Q8TE99 480 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 ATP8B4Q8TF62 1192 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 CCDC51Q96ER9 411 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 DRC1Q96MC2 740 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 PARVGQ9HBI0 331 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 FANCLQ9NW38 375 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 SEL1LQ9UBV2 794 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 TRPC6Q9Y210 931 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 GDAQ9Y2T3 454 aa17.4■□□□□ 0.38
SNX17-204ENST00000453453 TMEM150BA6NC51 233 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 PSMA7O14818 248 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 POLR3GO15318 223 aaPredicted RBP17.39■□□□□ 0.38
SNX17-204ENST00000453453 ADCY6O43306 1168 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 ELNP15502 786 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 ATP4AP20648 1035 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 RFC5P40937 340 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 POLGP54098 1239 aaPredicted RBP17.39■□□□□ 0.38
SNX17-204ENST00000453453 LONRF2Q1L5Z9 754 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 HDXQ7Z353 690 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 TRIM50Q86XT4 487 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 SMYD4Q8IYR2 804 aaPredicted RBP17.39■□□□□ 0.38
SNX17-204ENST00000453453 MYCT1Q8N699 235 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 IPO4Q8TEX9 1081 aaKnown RBP17.39■□□□□ 0.38
SNX17-204ENST00000453453 ATP6V0A4Q9HBG4 840 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 SPC25Q9HBM1 224 aa17.39■□□□□ 0.38
SNX17-204ENST00000453453 A6NJR5 290 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 SEPT4O43236 478 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 HIP1RO75146 1068 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 DUSP11O75319 330 aaKnown RBP17.39■□□□□ 0.37
SNX17-204ENST00000453453 HOXD8P13378 290 aaPredicted RBP17.39■□□□□ 0.37
SNX17-204ENST00000453453 PRKAR2AP13861 404 aaKnown RBP17.39■□□□□ 0.37
SNX17-204ENST00000453453 FECHP22830 423 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 MARK3P27448 753 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 CACNB2Q08289 660 aaPredicted RBP17.39■□□□□ 0.37
SNX17-204ENST00000453453 EHHADHQ08426 723 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 PLCB4Q15147 1175 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 COBLL1Q53SF7 1204 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 KLHL10Q6JEL2 608 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 SFR1Q86XK3 245 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 SLAIN1Q8ND83 568 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 TRPV1Q8NER1 839 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 WDR24Q96S15 920 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 SH2D3AQ9BRG2 576 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 RASSF4Q9H2L5 321 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 ACBD3Q9H3P7 528 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 SLC39A2Q9NP94 309 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 WBP1LQ9NX94 342 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 MYO1AQ9UBC5 1043 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 TSKSQ9UJT2 592 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 CDC23Q9UJX2 597 aa17.39■□□□□ 0.37
SNX17-204ENST00000453453 A0A1B0GTH6 734 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 PPP1R3GB7ZBB8 358 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 HBP1O60381 514 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 RARBP10826 455 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 STK4Q13043 487 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 PAK1Q13153 545 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 FAM102BQ5T8I3 360 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 STXBP4Q6ZWJ1 553 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 ADSSL1Q8N142 457 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 NEK11Q8NG66 645 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 SLC7A3Q8WY07 619 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 KIFAP3Q92845 792 aa17.38■□□□□ 0.37
SNX17-204ENST00000453453 DHTKD1Q96HY7 919 aaPredicted RBP17.38■□□□□ 0.37
SNX17-204ENST00000453453 LARSQ9P2J5 1176 aaKnown RBP17.38■□□□□ 0.37
SNX17-204ENST00000453453 SYNRGQ9UMZ2 1314 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 RSPH10B2B2RC85 870 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 AKR1B15C9JRZ8 316 aaPredicted RBP17.37■□□□□ 0.37
SNX17-204ENST00000453453 RSPH10BP0C881 870 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 ZNF286BP0CG31 522 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 ACTN2P35609 894 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 PRCPP42785 496 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 ZNF131P52739 623 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 CHMP4BP1P59074 171 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 EMC2Q15006 297 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 MAEAQ7L5Y9 396 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 JPH2Q9BR39 696 aaPredicted RBP17.37■□□□□ 0.37
SNX17-204ENST00000453453 MRPL44Q9H9J2 332 aaKnown RBP17.37■□□□□ 0.37
SNX17-204ENST00000453453 OLFML3Q9NRN5 406 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 CTNND2Q9UQB3 1225 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 TRIM17Q9Y577 477 aa17.37■□□□□ 0.37
SNX17-204ENST00000453453 H3BRB1 525 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 KIF5CO60282 957 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 CD44P16070 742 aaKnown RBP17.36■□□□□ 0.37
SNX17-204ENST00000453453 TBC1D8BQ0IIM8 1120 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 TRIM32Q13049 653 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 NR1I3Q14994 352 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 FSCN1Q16658 493 aaKnown RBP17.36■□□□□ 0.37
SNX17-204ENST00000453453 ZNF484Q5JVG2 852 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 ODR4Q5SWX8 454 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 FAM178BQ8IXR5 827 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 MYOCDQ8IZQ8 938 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 GUF1Q8N442 669 aaKnown RBP17.36■□□□□ 0.37
SNX17-204ENST00000453453 KIAA0895Q8NCT3 520 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 SLC17A8Q8NDX2 589 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 NELFBQ8WX92 580 aa17.36■□□□□ 0.37
SNX17-204ENST00000453453 HPS3Q969F9 1004 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms