RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 SAMM50Q9Y512 469 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 NID2Q14112 1375 aa13.17□□□□□ -0.3
HERC3-207ENST00000452979 CARNS1A5YM72 827 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 H0Y858 1186 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 MSH4O15457 936 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 BRD1O95696 1058 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 SFNP31947 248 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 METAP2P50579 478 aaKnown RBP eCLIP13.16□□□□□ -0.3
HERC3-207ENST00000452979 POLGP54098 1239 aaPredicted RBP13.16□□□□□ -0.3
HERC3-207ENST00000452979 GIT2Q14161 759 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 FBXL16Q8N461 479 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 RNF169Q8NCN4 708 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 BICD2Q8TD16 824 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 SLC22A17Q8WUG5 538 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 SLC5A5Q92911 643 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 CEP89Q96ST8 783 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 ZBP1Q9H171 429 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 TSHZ2Q9NRE2 1034 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 DZANK1Q9NVP4 752 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 USTQ9Y2C2 406 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 DENND4AQ7Z401 1863 aa13.16□□□□□ -0.3
HERC3-207ENST00000452979 IGKV6-21A0A0C4DH24 114 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 NT5C1B-RDH14C9J2C7 533 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 STBD1O95210 358 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 CTSAP10619 480 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 FGFR4P22455 802 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 SP100P23497 879 aaPredicted RBP13.15□□□□□ -0.3
HERC3-207ENST00000452979 PHKA2P46019 1235 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 JAK3P52333 1124 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 PRKCEQ02156 737 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 UGCGQ16739 394 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 ATAT1Q5SQI0 421 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 KIAA1841Q6NSI8 718 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 DDX53Q86TM3 631 aaKnown RBP13.15□□□□□ -0.3
HERC3-207ENST00000452979 PLCD3Q8N3E9 789 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 TMEM105Q8N8V8 129 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 RDM1Q8NG50 284 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 KCNB2Q92953 911 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 TMEM169Q96HH4 297 aa13.15□□□□□ -0.3
HERC3-207ENST00000452979 ZNF668Q96K58 619 aaPredicted RBP13.15□□□□□ -0.3
HERC3-207ENST00000452979 GCOM2Q9BZD3 368 aaPredicted RBP13.15□□□□□ -0.3
HERC3-207ENST00000452979 CFAP54Q96N23 3096 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 ZNF623O75123 536 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 CDC45O75419 566 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 SKIP12755 728 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 NBL1P41271 181 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 CLCN5P51795 746 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 TBC1D8BQ0IIM8 1120 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 DRP2Q13474 957 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 NTRK3Q16288 839 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 B3GNT9Q6UX72 402 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 TMEM173Q86WV6 379 aaPredicted RBP13.14□□□□□ -0.31
HERC3-207ENST00000452979 VPS52Q8N1B4 723 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 C12orf76Q8N812 135 aaPredicted RBP13.14□□□□□ -0.31
HERC3-207ENST00000452979 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 IGSF21Q96ID5 467 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 UNC45AQ9H3U1 944 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 SMOC2Q9H3U7 446 aa13.14□□□□□ -0.31
HERC3-207ENST00000452979 CYP3A7-CYP3A51PA0A087WV96 503 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 GAS7O60861 476 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 CSDE1O75534 798 aaKnown RBP13.13□□□□□ -0.31
HERC3-207ENST00000452979 PSMD10O75832 226 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 GALTP07902 379 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 WEE2P0C1S8 567 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 EPCAMP16422 314 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 CYP3A7P24462 503 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 Q4G0T1 1027 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 XKR3Q5GH77 459 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 RARS2Q5T160 578 aaKnown RBP13.13□□□□□ -0.31
HERC3-207ENST00000452979 LRCH2Q5VUJ6 765 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 ASTLQ6HA08 431 aaPredicted RBP13.13□□□□□ -0.31
HERC3-207ENST00000452979 KANK3Q6NY19 840 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 Q6ZUG5 572 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 ZNF410Q86VK4 478 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 PPFIBP1Q86W92 1011 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 TDRD5Q8NAT2 981 aaKnown RBP13.13□□□□□ -0.31
HERC3-207ENST00000452979 CCDC148Q8NFR7 591 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 PHKBQ93100 1093 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 TEKT3Q9BXF9 490 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 RNF26Q9BY78 433 aaPredicted RBP13.13□□□□□ -0.31
HERC3-207ENST00000452979 AGXT2Q9BYV1 514 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 INO80BQ9C086 356 aaPredicted RBP13.13□□□□□ -0.31
HERC3-207ENST00000452979 NRDE2Q9H7Z3 1164 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 LIMD1Q9UGP4 676 aa13.13□□□□□ -0.31
HERC3-207ENST00000452979 NAP1L2Q9ULW6 460 aaPredicted RBP13.13□□□□□ -0.31
HERC3-207ENST00000452979 ZFHX2Q9C0A1 2572 aaPredicted RBP13.12□□□□□ -0.31
HERC3-207ENST00000452979 A0A087WZ62 844 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.12□□□□□ -0.31
HERC3-207ENST00000452979 MAFO75444 373 aaPredicted RBP13.12□□□□□ -0.31
HERC3-207ENST00000452979 OFD1O75665 1012 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 ASGR2P07307 311 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 CPA1P15085 419 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 SFPQP23246 707 aaKnown RBP eCLIP13.12□□□□□ -0.31
HERC3-207ENST00000452979 DNM2P50570 870 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 FGD1P98174 961 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 NOMO2Q5JPE7 1267 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 GLB1LQ6UWU2 654 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 ASCL5Q7RTU5 278 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms