RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 TPH2Q8IWU9 490 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 CCDC155Q8N6L0 562 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 PIGOQ8TEQ8 1089 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 RIT2Q99578 217 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 CRISPLD2Q9H0B8 497 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 OLFML3Q9NRN5 406 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 CTAGE9A4FU28 777 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 IPO5O00410 1097 aaKnown RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 PDXKO00764 312 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 TFRCP02786 760 aaKnown RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 MYCLP12524 364 aaPredicted RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 ADAM9Q13443 819 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 TUBB2AQ13885 445 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 PDXDC1Q6P996 788 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 RSRC2Q7L4I2 434 aaKnown RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 NIPA1Q7RTP0 329 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 UBXN4Q92575 508 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 IWS1Q96ST2 819 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 NAPGQ99747 312 aaPredicted RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 TUBB2BQ9BVA1 445 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 TEKT3Q9BXF9 490 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 BCAS3Q9H6U6 928 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 VTA1Q9NP79 307 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 ARHGAP20Q9P2F6 1191 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 WRAP73Q9P2S5 460 aaPredicted RBP11.76□□□□□ -0.53
PKP4-206ENST00000452162 CDC23Q9UJX2 597 aa11.76□□□□□ -0.53
PKP4-206ENST00000452162 RCCD1A6NED2 376 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 CETN3O15182 167 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 PRPF6O94906 941 aaKnown RBP11.75□□□□□ -0.53
PKP4-206ENST00000452162 AKR1A1P14550 325 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 STXBP2Q15833 593 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 VSIG10LQ86VR7 867 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 NEK11Q8NG66 645 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 MPHOSPH6Q99547 160 aaKnown RBP11.75□□□□□ -0.53
PKP4-206ENST00000452162 OGDHLQ9ULD0 1010 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 FAM184BQ9ULE4 1060 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.75□□□□□ -0.531e-6■■■□□ 18.3
PKP4-206ENST00000452162 DOCK5Q9H7D0 1870 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 LRRC53A6NM62 1247 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 ZNF263O14978 683 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 ZBTB39O15060 712 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 MSCO60682 206 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 NOL4O94818 638 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 PLEKP08567 350 aaPredicted RBP11.75□□□□□ -0.53
PKP4-206ENST00000452162 NR2F2P24468 414 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 GJC2Q5T442 439 aaPredicted RBP11.75□□□□□ -0.53
PKP4-206ENST00000452162 JAKMIP2Q96AA8 810 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 ARID3AQ99856 593 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 TYW1Q9NV66 732 aaKnown RBP11.75□□□□□ -0.53
PKP4-206ENST00000452162 GUCA1BQ9UMX6 200 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 TFR2Q9UP52 801 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
PKP4-206ENST00000452162 LOXHD1Q8IVV2 1947 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 CALUO43852 315 aaPredicted RBP11.74□□□□□ -0.53
PKP4-206ENST00000452162 RGS20O76081 388 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 LCA5LO95447 670 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 RARBP10826 455 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 SMPD1P17405 629 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 ZNF131P52739 623 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
PKP4-206ENST00000452162 MRPS9P82933 396 aaKnown RBP11.74□□□□□ -0.53
PKP4-206ENST00000452162 AMPD2Q01433 879 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 SEPT14Q6ZU15 432 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 RRAGAQ7L523 313 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 FRMD5Q7Z6J6 570 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 KIAA1328Q86T90 577 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 NEK9Q8TD19 979 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 NACC1Q96RE7 527 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 CEP72Q9P209 647 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 ZMYM2Q9UBW7 1377 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 EIF3DO15371 548 aaKnown RBP eCLIP11.74□□□□□ -0.53
PKP4-206ENST00000452162 DHX15O43143 795 aaKnown RBP11.74□□□□□ -0.53
PKP4-206ENST00000452162 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
PKP4-206ENST00000452162 FAM13AO94988 1023 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 GCNT3O95395 438 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 PGK1P00558 417 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 MNX1P50219 401 aaPredicted RBP11.74□□□□□ -0.53
PKP4-206ENST00000452162 TNFAIP2Q03169 654 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 CCDC122Q5T0U0 273 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 SRGAP1Q7Z6B7 1085 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 CCDC42Q96M95 316 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 FIZ1Q96SL8 496 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 LXNQ9BS40 222 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 LSM14BQ9BX40 385 aaKnown RBP11.74□□□□□ -0.53
PKP4-206ENST00000452162 LACRTQ9GZZ8 138 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 POLD4Q9HCU8 107 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 KCNH7Q9NS40 1196 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 KCND2Q9NZV8 630 aa11.74□□□□□ -0.53
PKP4-206ENST00000452162 RBM47A0AV96 593 aaKnown RBP11.73□□□□□ -0.53
PKP4-206ENST00000452162 IPO7O95373 1038 aaKnown RBP11.73□□□□□ -0.53
PKP4-206ENST00000452162 ARIH2O95376 493 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 CCND2P30279 289 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 EIF4A3P38919 411 aaKnown RBP11.73□□□□□ -0.53
PKP4-206ENST00000452162 VAV2P52735 878 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 CYP27A1Q02318 531 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 IQSEC1Q6DN90 963 aa11.73□□□□□ -0.53
PKP4-206ENST00000452162 DIS3LQ8TF46 1054 aaKnown RBP11.73□□□□□ -0.53
PKP4-206ENST00000452162 SYN2Q92777 582 aaPredicted RBP11.73□□□□□ -0.53
PKP4-206ENST00000452162 PARVGQ9HBI0 331 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms