RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 LRRC55Q6ZSA7 311 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 ADGRD2Q7Z7M1 963 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 CCDC83Q8IWF9 413 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 COLGALT1Q8NBJ5 622 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 SLC7A3Q8WY07 619 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 CEP170P1Q96L14 293 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 NLRP4Q96MN2 994 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 MTMR9Q96QG7 549 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 TRAIPQ9BWF2 469 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 ZSWIM4Q9H7M6 989 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 IFT122Q9HBG6 1241 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 DACT1Q9NYF0 836 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 PCDHB12Q9Y5F1 795 aa13.96□□□□□ -0.17
CPSF4-208ENST00000452047 ZBTB39O15060 712 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 TBX10O75333 385 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 FGF18O76093 207 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 SLITRK3O94933 977 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 EOMESO95936 686 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 LAG3P18627 525 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 SFPQP23246 707 aaKnown RBP eCLIP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 RFC5P40937 340 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 POLGP54098 1239 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 UBE3AQ05086 875 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 CTTNQ14247 550 aaKnown RBP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 CSPP1Q1MSJ5 1256 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 PUS10Q3MIT2 529 aaKnown RBP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 FAM178BQ8IXR5 827 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 LRRC43Q8N309 656 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 HSD17B14Q9BPX1 270 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 EIF2AK1Q9BQI3 630 aaKnown RBP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 LLPHQ9BRT6 129 aaKnown RBP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 INO80BQ9C086 356 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 TTC12Q9H892 705 aaPredicted RBP13.95□□□□□ -0.18
CPSF4-208ENST00000452047 CD320Q9NPF0 282 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 CHST12Q9NRB3 414 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 AAASQ9NRG9 546 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 PCDHA12Q9UN75 941 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 PCDHGC5Q9Y5F6 944 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 COL4A3BPQ9Y5P4 624 aa13.95□□□□□ -0.18
CPSF4-208ENST00000452047 LINC01565O15544 149 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 GAS2O43903 313 aaKnown RBP13.94□□□□□ -0.18
CPSF4-208ENST00000452047 LYPLA2O95372 231 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 PHKA2P46019 1235 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 RBM25P49756 843 aaKnown RBP13.94□□□□□ -0.18
CPSF4-208ENST00000452047 GUCY1B3Q02153 619 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 EMC2Q15006 297 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 OTUD6AQ7L8S5 288 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 EXOC8Q8IYI6 725 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 PRPF31Q8WWY3 499 aaKnown RBP13.94□□□□□ -0.18
CPSF4-208ENST00000452047 PSPC1Q8WXF1 523 aaKnown RBP13.94□□□□□ -0.18
CPSF4-208ENST00000452047 KHSRPQ92945 711 aaKnown RBP eCLIP13.94□□□□□ -0.18
CPSF4-208ENST00000452047 TMEM143Q96AN5 459 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 TMEM60Q9H2L4 133 aa13.94□□□□□ -0.18
CPSF4-208ENST00000452047 BMP2KQ9NSY1 1161 aaPredicted RBP13.94□□□□□ -0.18
CPSF4-208ENST00000452047 PIN4Q9Y237 131 aaKnown RBP13.94□□□□□ -0.18
CPSF4-208ENST00000452047 PBX3P40426 434 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 TXKP42681 527 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 PLCB3Q01970 1234 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 LAMTOR4Q0VGL1 99 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 ADAM15Q13444 863 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 XKR9Q5GH70 373 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 TWF2Q6IBS0 349 aaKnown RBP13.93□□□□□ -0.18
CPSF4-208ENST00000452047 KCNT2Q6UVM3 1135 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 CATSPER4Q7RTX7 472 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 TPH2Q8IWU9 490 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 THNSL1Q8IYQ7 743 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 ABI1Q8IZP0 508 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 EFHBQ8N7U6 833 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 RNF169Q8NCN4 708 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 FBXO18Q8NFZ0 1043 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 HELQQ8TDG4 1101 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 PPP2R3CQ969Q6 453 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 C8orf76Q96K31 380 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 ZSCAN31Q96LW9 406 aaPredicted RBP13.93□□□□□ -0.18
CPSF4-208ENST00000452047 IGFLR1Q9H665 355 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 MINDY3Q9H8M7 445 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 XPNPEP1Q9NQW7 623 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 TLR9Q9NR96 1032 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 SH2B1Q9NRF2 756 aaPredicted RBP13.93□□□□□ -0.18
CPSF4-208ENST00000452047 AGPAT5Q9NUQ2 364 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 LZTS1Q9Y250 596 aa13.93□□□□□ -0.18
CPSF4-208ENST00000452047 POTEMA6NI47 508 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 FSCN2O14926 492 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 ZNF623O75123 536 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 GLP2RO95838 553 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 MCM7P33993 719 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 ERVFC1P60507 584 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 HMGN5P82970 282 aaKnown RBP13.92□□□□□ -0.18
CPSF4-208ENST00000452047 SAFBQ15424 915 aaKnown RBP eCLIP13.92□□□□□ -0.18
CPSF4-208ENST00000452047 SRGAP1Q7Z6B7 1085 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 FERMT3Q86UX7 667 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 TCP11Q8WWU5 503 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 MSLNLQ96KJ4 702 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 ZNF558Q96NG5 402 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 MTRQ99707 1265 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 FOXP1Q9H334 677 aaPredicted RBP13.92□□□□□ -0.18
CPSF4-208ENST00000452047 ANKEF1Q9NU02 776 aa13.92□□□□□ -0.18
CPSF4-208ENST00000452047 FAM105AQ9NUU6 356 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms