RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 TMEM40Q8WWA1 233 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 NLRP7Q8WX94 980 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 DDX12PQ92771 950 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 KIFAP3Q92845 792 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 VWCEQ96DN2 955 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 TIGD1Q96MW7 591 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 SCLT1Q96NL6 688 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 FDXACB1Q9BRP7 624 aaPredicted RBP14.43□□□□□ -0.1
VPS33A-202ENST00000451053 TIPINQ9BVW5 301 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 TNMDQ9H2S6 317 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 MAGEF1Q9HAY2 307 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 DACT1Q9NYF0 836 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 HOOK1Q9UJC3 728 aaKnown RBP14.43□□□□□ -0.1
VPS33A-202ENST00000451053 DNAH12Q6ZR08 3092 aa14.43□□□□□ -0.1
VPS33A-202ENST00000451053 ASAP2O43150 1006 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 NR1I2O75469 434 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 CSDE1O75534 798 aaKnown RBP14.42□□□□□ -0.1
VPS33A-202ENST00000451053 SRGAP2CP0DJJ0 459 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 GHRP10912 638 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 CASP1P29466 404 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 CRYBB1P53674 252 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-202ENST00000451053 MDM2Q00987 491 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-202ENST00000451053 FPGSQ05932 587 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 MXD4Q14582 209 aaPredicted RBP14.42□□□□□ -0.1
VPS33A-202ENST00000451053 LPIN1Q14693 890 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 FBXO47Q5MNV8 452 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 KANK3Q6NY19 840 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 CAVIN1Q6NZI2 390 aaKnown RBP14.42□□□□□ -0.1
VPS33A-202ENST00000451053 KRBA2Q6ZNG9 492 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 DEFB128Q7Z7B8 93 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 ZNF410Q86VK4 478 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 TMEM199Q8N511 208 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 RNF149Q8NC42 400 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 DNAJC19Q96DA6 116 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 PAGE5Q96GU1 130 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 DRC1Q96MC2 740 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 NUP62CLQ9H1M0 184 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 IFT122Q9HBG6 1241 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 ODF2LQ9ULJ1 636 aa14.42□□□□□ -0.1
VPS33A-202ENST00000451053 LRRIQ4A6NIV6 560 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 FAM13AO94988 1023 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 LETM1O95202 739 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-202ENST00000451053 DARSP14868 501 aaKnown RBP14.41□□□□□ -0.1
VPS33A-202ENST00000451053 RFC2P35250 354 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 MAGEA10P43363 369 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-202ENST00000451053 EPHB4P54760 987 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 TFDP1Q14186 410 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 TCTN1Q2MV58 587 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 CNNM3Q8NE01 707 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 LBHD1Q9BQE6 289 aaPredicted RBP14.41□□□□□ -0.1
VPS33A-202ENST00000451053 KIFC3Q9BVG8 833 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 TRIM9Q9C026 710 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 BLZF1Q9H2G9 400 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 MINDY3Q9H8M7 445 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 AGO3Q9H9G7 860 aaKnown RBP14.41□□□□□ -0.1
VPS33A-202ENST00000451053 NOC2LQ9Y3T9 749 aaKnown RBP14.41□□□□□ -0.1
VPS33A-202ENST00000451053 ADGRA3Q8IWK6 1321 aa14.41□□□□□ -0.1
VPS33A-202ENST00000451053 TBCAO75347 108 aaKnown RBP14.4□□□□□ -0.1
VPS33A-202ENST00000451053 PARNO95453 639 aaKnown RBP14.4□□□□□ -0.1
VPS33A-202ENST00000451053 CXCL10P02778 98 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 PRR29P0C7W0 189 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 ACRP10323 421 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 PLS3P13797 630 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 FGFR4P22455 802 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 EIF4BP23588 611 aaKnown RBP14.4□□□□□ -0.1
VPS33A-202ENST00000451053 CD52P31358 61 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 NAMPTP43490 491 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 PHKA2P46019 1235 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 NPTX2P47972 431 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 ZNF131P52739 623 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 PEX3P56589 373 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 ASIC1P78348 528 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 CDC42EP1Q00587 391 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 AMPD3Q01432 767 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 PPIGQ13427 754 aaKnown RBP eCLIP14.4□□□□□ -0.1
VPS33A-202ENST00000451053 CUL4BQ13620 913 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 PPP2R5AQ15172 486 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 TSHZ1Q6ZSZ6 1077 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 ELOA2Q8IYF1 753 aaPredicted RBP14.4□□□□□ -0.1
VPS33A-202ENST00000451053 ZNF710Q8N1W2 664 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 IFT74Q96LB3 600 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 C7orf25Q9BPX7 421 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 GCOM2Q9BZD3 368 aaPredicted RBP14.4□□□□□ -0.1
VPS33A-202ENST00000451053 LRRC27Q9C0I9 530 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 CLSTN2Q9H4D0 955 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 ZHX3Q9H4I2 956 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 IL23AQ9NPF7 189 aa14.4□□□□□ -0.1
VPS33A-202ENST00000451053 CCDC169A6NNP5 214 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 IDEP14735 1019 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 PTENP60484 403 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 POU5F1BQ06416 359 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 DMP1Q13316 513 aaPredicted RBP14.39□□□□□ -0.11
VPS33A-202ENST00000451053 CDCA2Q69YH5 1023 aaPredicted RBP14.39□□□□□ -0.11
VPS33A-202ENST00000451053 CNNM4Q6P4Q7 775 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 C16orf59Q7L2K0 433 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 FAM228AQ86W67 206 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 SFR1Q86XK3 245 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 IFNLR1Q8IU57 520 aaPredicted RBP14.39□□□□□ -0.11
VPS33A-202ENST00000451053 MYCT1Q8N699 235 aa14.39□□□□□ -0.11
VPS33A-202ENST00000451053 DEPTORQ8TB45 409 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms