RNA–Protein interactions for RNA: ENST00000450867.1

COL3A1-203, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL3A1, Length 268 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-203ENST00000450867 CFAP45Q9UL16 551 aa15.95■□□□□ 0.14
COL3A1-203ENST00000450867 KIAA1671Q9BY89 1806 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 MGEA5O60502 916 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 SFPQP23246 707 aaKnown RBP eCLIP15.94■□□□□ 0.14
COL3A1-203ENST00000450867 GLRA2P23416 452 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 GUCY2CP25092 1073 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 PTENP60484 403 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 CAPSQ13938 189 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 C1orf186Q6ZWK4 172 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 USP49Q70CQ1 688 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 SYT2Q8N9I0 419 aaPredicted RBP15.94■□□□□ 0.14
COL3A1-203ENST00000450867 KCNG4Q8TDN1 519 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 CDK5RAP3Q96JB5 506 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 NLRP4Q96MN2 994 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 CLIC6Q96NY7 704 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 TIPINQ9BVW5 301 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 TRAIPQ9BWF2 469 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 POLR3FQ9H1D9 316 aaPredicted RBP15.94■□□□□ 0.14
COL3A1-203ENST00000450867 RGS18Q9NS28 235 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 BLOC1S4Q9NUP1 217 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 RCOR1Q9UKL0 485 aa15.94■□□□□ 0.14
COL3A1-203ENST00000450867 C9IYK1 514 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 PLCG1P19174 1290 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 PHKA2P46019 1235 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 SLC12A3P55017 1021 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 DNM1Q05193 864 aaKnown RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 NFX1Q12986 1120 aaKnown RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 TFDP1Q14186 410 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 AXDND1Q5T1B0 1012 aaPredicted RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 CDCA2Q69YH5 1023 aaPredicted RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 RINT1Q6NUQ1 792 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 RNF149Q8NC42 400 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 SP7Q8TDD2 431 aaPredicted RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 SYMPKQ92797 1274 aaKnown RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 KIFAP3Q92845 792 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 EPSTI1Q96J88 318 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 ZNF668Q96K58 619 aaPredicted RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 SCLT1Q96NL6 688 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 RAD9AQ99638 391 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 MINDY3Q9H8M7 445 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 RC3H2Q9HBD1 1191 aaKnown RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 GPRC5CQ9NQ84 441 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 CHST12Q9NRB3 414 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 C1orf112Q9NSG2 853 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 YBX2Q9Y2T7 364 aaKnown RBP15.93■□□□□ 0.14
COL3A1-203ENST00000450867 ATP6V1DQ9Y5K8 247 aa15.93■□□□□ 0.14
COL3A1-203ENST00000450867 CUTAO60888 179 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 PLA2G4BP0C869 781 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 PBX2P40425 430 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 NUCB2P80303 420 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 FAM189BP81408 668 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 MAPK7Q13164 816 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 KARSQ15046 597 aaKnown RBP15.92■□□□□ 0.14
COL3A1-203ENST00000450867 MYOCDQ8IZQ8 938 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 DAW1Q8N136 415 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 RUSC1Q9BVN2 902 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 STK17AQ9UEE5 414 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 MSRAQ9UJ68 235 aa15.92■□□□□ 0.14
COL3A1-203ENST00000450867 CDH23Q9H251 3354 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 SRGAP2CP0DJJ0 459 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 TXLNAP40222 546 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 NAMPTP43490 491 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 SARSP49591 514 aaKnown RBP15.91■□□□□ 0.14
COL3A1-203ENST00000450867 RABGGTBP53611 331 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 MBTD1Q05BQ5 628 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 PPP2R5AQ15172 486 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 AMHR2Q16671 573 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 SPECC1Q5M775 1068 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 FAM102BQ5T8I3 360 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 SLC24A5Q71RS6 500 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 NPAS4Q8IUM7 802 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 BSNDQ8WZ55 320 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 LARP4BQ92615 738 aaKnown RBP15.91■□□□□ 0.14
COL3A1-203ENST00000450867 RAD54LQ92698 747 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 TIFAQ96CG3 184 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 ADAM2Q99965 735 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 ELAC1Q9H777 363 aaKnown RBP15.91■□□□□ 0.14
COL3A1-203ENST00000450867 C17orf75Q9HAS0 396 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 AGPAT5Q9NUQ2 364 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 RNF216Q9NWF9 866 aaPredicted RBP15.91■□□□□ 0.14
COL3A1-203ENST00000450867 INSL6Q9Y581 213 aa15.91■□□□□ 0.14
COL3A1-203ENST00000450867 DENND3A2RUS2 1198 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 TLL1O43897 1013 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 CSDE1O75534 798 aaKnown RBP15.9■□□□□ 0.14
COL3A1-203ENST00000450867 FGFR4P22455 802 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 KRT85P78386 507 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 ZRSR1Q15695 479 aaKnown RBP15.9■□□□□ 0.14
COL3A1-203ENST00000450867 FAM187BQ17R55 369 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 NAALADL2Q58DX5 795 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 ARSHQ5FYA8 562 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 PPP4R3CPQ6ZMV5 832 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 TMCO2Q7Z6W1 182 aaPredicted RBP15.9■□□□□ 0.14
COL3A1-203ENST00000450867 KCNN1Q92952 543 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 ZNF689Q96CS4 500 aaPredicted RBP15.9■□□□□ 0.14
COL3A1-203ENST00000450867 DRC1Q96MC2 740 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 PLIN2Q99541 437 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 TTYH1Q9H313 450 aaPredicted RBP15.9■□□□□ 0.14
COL3A1-203ENST00000450867 DACT1Q9NYF0 836 aa15.9■□□□□ 0.14
COL3A1-203ENST00000450867 DAXXQ9UER7 740 aaPredicted RBP15.9■□□□□ 0.14
COL3A1-203ENST00000450867 CCDC39Q9UFE4 941 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms