RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 LUC7L2Q9Y383 392 aaKnown RBP15.64■□□□□ 0.09
USP39-207ENST00000450066 RASSF10A6NK89 507 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 H0YCG3 227 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 RNF225M0QZC1 329 aaPredicted RBP15.63■□□□□ 0.09
USP39-207ENST00000450066 HOXC6P09630 235 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 XRCC5P13010 732 aaKnown RBP15.63■□□□□ 0.09
USP39-207ENST00000450066 FECHP22830 423 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 KRT9P35527 623 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 ADCYAP1R1P41586 468 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 CASP4P49662 377 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 ACVR2BQ13705 512 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 TRIM50Q86XT4 487 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 MAP4K3Q8IVH8 894 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 EXOC8Q8IYI6 725 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 PPTC7Q8NI37 304 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 BORCS6Q96GS4 357 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 PCMTD1Q96MG8 357 aaPredicted RBP15.63■□□□□ 0.09
USP39-207ENST00000450066 ABHD10Q9NUJ1 306 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 FRMD4BQ9Y2L6 1034 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 A0A1W2PQJ5 194 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 DENND3A2RUS2 1198 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 MAFO75444 373 aaPredicted RBP15.63■□□□□ 0.09
USP39-207ENST00000450066 ARL2P36404 184 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 KLK7P49862 253 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 IRF5Q13568 498 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 FAM186BQ8IYM0 893 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 KCNN1Q92952 543 aa15.63■□□□□ 0.09
USP39-207ENST00000450066 CYP2J2P51589 502 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 KCNH2Q12809 1159 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 CRHR2Q13324 411 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 PLCB4Q15147 1175 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 DUSP28Q4G0W2 176 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 IQSEC1Q6DN90 963 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 CCAR2Q8N163 923 aaKnown RBP15.62■□□□□ 0.09
USP39-207ENST00000450066 OR8K1Q8NGG5 319 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 USP6NLQ92738 828 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 TMEM143Q96AN5 459 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 DNAJC7Q99615 494 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 KIFC3Q9BVG8 833 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 ARHGAP28Q9P2N2 729 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 ADGRA3Q8IWK6 1321 aa15.62■□□□□ 0.09
USP39-207ENST00000450066 GAS2O43903 313 aaKnown RBP15.61■□□□□ 0.09
USP39-207ENST00000450066 MARK3P27448 753 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 PPP2R5AQ15172 486 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 GJC2Q5T442 439 aaPredicted RBP15.61■□□□□ 0.09
USP39-207ENST00000450066 E4F1Q66K89 784 aaPredicted RBP15.61■□□□□ 0.09
USP39-207ENST00000450066 ERAP1Q9NZ08 941 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 ZBTB42B2RXF5 422 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 CA12O43570 354 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 EXOC3O60645 756 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 TOMM70O94826 608 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 AFPP02771 609 aaKnown RBP15.61■□□□□ 0.09
USP39-207ENST00000450066 NAMPTP43490 491 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 ZBED6P86452 979 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 CCDC155Q8N6L0 562 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 SLC35C1Q96A29 364 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 MMRN2Q9H8L6 949 aa15.61■□□□□ 0.09
USP39-207ENST00000450066 ZHX1Q9UKY1 873 aaPredicted RBP15.61■□□□□ 0.09
USP39-207ENST00000450066 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.6■□□□□ 0.09
USP39-207ENST00000450066 HBP1O60381 514 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 PPFIA4O75335 1185 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 SMPD1P17405 629 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 GLRA2P23416 452 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 KCNMA1Q12791 1236 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 TMTC1Q8IUR5 882 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 ZNF397Q8NF99 534 aaPredicted RBP15.6■□□□□ 0.09
USP39-207ENST00000450066 ASAP3Q8TDY4 903 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 AFG1LQ8WV93 481 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 SOCS4Q8WXH5 440 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 ZIC5Q96T25 663 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 JPH2Q9BR39 696 aaPredicted RBP15.6■□□□□ 0.09
USP39-207ENST00000450066 EDEM3Q9BZQ6 932 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 FAM207AQ9NSI2 230 aaPredicted RBP15.6■□□□□ 0.09
USP39-207ENST00000450066 AGPAT5Q9NUQ2 364 aa15.6■□□□□ 0.09
USP39-207ENST00000450066 IGKV6-21A0A0C4DH24 114 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 TISP43B9A030 160 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 LGALS2P05162 132 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 CNGA1P29973 690 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 RGS2P41220 211 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 TSR1Q2NL82 804 aaKnown RBP15.59■□□□□ 0.09
USP39-207ENST00000450066 BRDTQ58F21 947 aaPredicted RBP15.59■□□□□ 0.09
USP39-207ENST00000450066 DCAF17Q5H9S7 520 aaPredicted RBP15.59■□□□□ 0.09
USP39-207ENST00000450066 XXYLT1Q8NBI6 393 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 CBWD1Q9BRT8 395 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 GJD2Q9UKL4 321 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 TRPC6Q9Y210 931 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 USP27XA6NNY8 438 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 MAPK13O15264 365 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 CCP110O43303 1012 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 OFD1O75665 1012 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 ALDH1A1P00352 501 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 HOXD8P13378 290 aaPredicted RBP15.59■□□□□ 0.09
USP39-207ENST00000450066 TCERG1LQ5VWI1 586 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 IER5Q5VY09 327 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 OLFML2BQ68BL8 750 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 CYP26C1Q6V0L0 522 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 NEK11Q8NG66 645 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 TCP11Q8WWU5 503 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 HSPBP1Q9NZL4 362 aa15.59■□□□□ 0.09
USP39-207ENST00000450066 TNPO2O14787 897 aaKnown RBP15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms