RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 ANKRD7Q92527 254 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 CRAMP1Q96RY5 1269 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 ELAC2Q9BQ52 826 aaKnown RBP11.16□□□□□ -0.62
CTC1-202ENST00000449476 ZWILCHQ9H900 591 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 NOC2LQ9Y3T9 749 aaKnown RBP11.16□□□□□ -0.62
CTC1-202ENST00000449476 WDR91A4D1P6 747 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 NDUFB10O96000 172 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 MMEP08473 750 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 SOX5P35711 763 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 MAGOHP61326 146 aaKnown RBP11.16□□□□□ -0.62
CTC1-202ENST00000449476 PSMC5P62195 406 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 RCN2Q14257 317 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 MAPK6Q16659 721 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 TRIM42Q8IWZ5 723 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 MAP3K14Q99558 947 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 ATF5Q9Y2D1 282 aaPredicted RBP11.16□□□□□ -0.62
CTC1-202ENST00000449476 DIP2BQ9P265 1576 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 PPP1R3GB7ZBB8 358 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 SWSAP1Q6NVH7 229 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 DNAAF3Q8N9W5 541 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 WRNIP1Q96S55 665 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 NUP85Q9BW27 656 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.16□□□□□ -0.62
CTC1-202ENST00000449476 RBM41Q96IZ5 413 aaKnown RBP11.16□□□□□ -0.62
CTC1-202ENST00000449476 LRRC4Q9HBW1 653 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 SAYSD1Q9NPB0 183 aa11.16□□□□□ -0.62
CTC1-202ENST00000449476 SH3BP5O60239 455 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 ZBED1O96006 694 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 ECE1P42892 770 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 IRX4P78413 519 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 Q3C1V9 767 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 GJD4Q96KN9 370 aaPredicted RBP11.15□□□□□ -0.62
CTC1-202ENST00000449476 DDX23Q9BUQ8 820 aaKnown RBP11.15□□□□□ -0.62
CTC1-202ENST00000449476 SLITRK6Q9H5Y7 841 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 HOXC10Q9NYD6 342 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 AMACRQ9UHK6 382 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 HPSEQ9Y251 543 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 CTIFO43310 598 aaKnown RBP11.15□□□□□ -0.62
CTC1-202ENST00000449476 RFX1P22670 979 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 CDO1Q16878 200 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 RSRC2Q7L4I2 434 aaKnown RBP11.15□□□□□ -0.62
CTC1-202ENST00000449476 RNF25Q96BH1 459 aaPredicted RBP11.15□□□□□ -0.62
CTC1-202ENST00000449476 GINM1Q9NU53 330 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 CHRNA3P32297 505 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 GPR162Q16538 588 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 CALR3Q96L12 384 aaKnown RBP11.15□□□□□ -0.62
CTC1-202ENST00000449476 TUFT1Q9NNX1 390 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 PIM2Q9P1W9 311 aa11.15□□□□□ -0.62
CTC1-202ENST00000449476 SPATA31A1Q5TZJ5 1347 aa11.15□□□□□ -0.63
CTC1-202ENST00000449476 PMS2P54278 862 aa11.15□□□□□ -0.63
CTC1-202ENST00000449476 REEP2Q9BRK0 252 aa11.15□□□□□ -0.63
CTC1-202ENST00000449476 AGXT2Q9BYV1 514 aa11.15□□□□□ -0.63
CTC1-202ENST00000449476 SMYD2Q9NRG4 433 aa11.15□□□□□ -0.63
CTC1-202ENST00000449476 NYAP2Q9P242 653 aa11.15□□□□□ -0.63
CTC1-202ENST00000449476 FBXO40Q9UH90 709 aa11.15□□□□□ -0.63
CTC1-202ENST00000449476 PREX1Q8TCU6 1659 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 GSTA1P08263 222 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 GSTA2P09210 222 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 UCHL3P15374 230 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 ASPHQ12797 758 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 PRPSAP1Q14558 356 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 RAPH1Q70E73 1250 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 FBXL13Q8NEE6 735 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 SH2D3AQ9BRG2 576 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 PFASO15067 1338 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 GPC4O75487 556 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 RPSAP08865 295 aaKnown RBP11.14□□□□□ -0.63
CTC1-202ENST00000449476 PLS3P13797 630 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 ZNF18P17022 549 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 IREB2P48200 963 aaKnown RBP11.14□□□□□ -0.63
CTC1-202ENST00000449476 CDC42EP5Q6NZY7 148 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 HSPH1Q92598 858 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 FAM187AA6NFU0 413 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 TOB1P50616 345 aaPredicted RBP11.14□□□□□ -0.63
CTC1-202ENST00000449476 TRIM59Q8IWR1 403 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 MS4A14Q96JA4 679 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 FAM167AQ96KS9 214 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 RNPC3Q96LT9 517 aaKnown RBP11.14□□□□□ -0.63
CTC1-202ENST00000449476 FAM193BQ96PV7 902 aaPredicted RBP11.14□□□□□ -0.63
CTC1-202ENST00000449476 PITPNM3Q9BZ71 974 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 CCDC68Q9H2F9 335 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 JMJD4Q9H9V9 463 aa11.14□□□□□ -0.63
CTC1-202ENST00000449476 GPR75-ASB3A0A0A6YYF3 556 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 TBX3O15119 743 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 AP5Z1O43299 807 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 KLRK1P26718 216 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 MAGEA9P43362 315 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 PPP2R2AP63151 447 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 ST3GAL1Q11201 340 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 ZNF699Q32M78 642 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 EDRF1Q3B7T1 1238 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 PPP6R3Q5H9R7 873 aaPredicted RBP11.13□□□□□ -0.63
CTC1-202ENST00000449476 STRIP1Q5VSL9 837 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 CCDC137Q6PK04 289 aaKnown RBP11.13□□□□□ -0.63
CTC1-202ENST00000449476 PCGF5Q86SE9 256 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 TADA2BQ86TJ2 420 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 SRRM1Q8IYB3 904 aaKnown RBP11.13□□□□□ -0.63
CTC1-202ENST00000449476 PSPC1Q8WXF1 523 aaKnown RBP11.13□□□□□ -0.63
CTC1-202ENST00000449476 AP5M1Q9H0R1 490 aa11.13□□□□□ -0.63
CTC1-202ENST00000449476 FBXL5Q9UKA1 691 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms