RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 NLRP3Q96P20 1036 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 PANX2Q96RD6 677 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 ARL2BPQ9Y2Y0 163 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 MEGF6O75095 1541 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 GNA14O95837 355 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 HSPA6P17066 643 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 HLA-DPA1P20036 260 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 PRCPP42785 496 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 RFX8Q6ZV50 586 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 CCT7Q99832 543 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 DNAJC17Q9NVM6 304 aaKnown RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 IL1RAPL1Q9NZN1 696 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 APOBEC2Q9Y235 224 aaKnown RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 CPDO75976 1380 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 RSPH10B2B2RC85 870 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 RSPH10BP0C881 870 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 VEGFAP15692 232 aaPredicted RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 HIBADHP31937 336 aaKnown RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 WDR60Q8WVS4 1066 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 TGS1Q96RS0 853 aaKnown RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 FRMPD2Q68DX3 1309 aaPredicted RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 TTC26A0AVF1 554 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 CFAP69A5D8W1 941 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 SFI1A8K8P3 1242 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 RIMBP2O15034 1052 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 PECAM1P16284 738 aaPredicted RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 BFSP1Q12934 665 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 MKRN3Q13064 507 aaKnown RBP9.84□□□□□ -0.83
SMC6-207ENST00000448223 FSCBQ5H9T9 825 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 BLIDQ8IZY5 108 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 GIPC2Q8TF65 315 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 PNKPQ96T60 521 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 MAP3K14Q99558 947 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 MTRQ99707 1265 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 RNPEPQ9H4A4 650 aa9.84□□□□□ -0.83
SMC6-207ENST00000448223 H0YC42 278 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 DLGAP3O95886 979 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 NPR1P16066 1061 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 ARHGDIAP52565 204 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 OR9Q1Q8NGQ5 310 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 PKD2L2Q9NZM6 624 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 A0A087X0B3 334 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 TTI1O43156 1089 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 DAPK3O43293 454 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 NDUFA10O95299 355 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 CRKLP46109 303 aaKnown RBP9.83□□□□□ -0.84
SMC6-207ENST00000448223 KLK7P49862 253 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 ARFIP2P53365 341 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 LRRC36Q1X8D7 754 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 CABP7Q86V35 215 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 PACS2Q86VP3 889 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 PLD3Q8IV08 490 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 MCRS1Q96EZ8 462 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 SEC16BQ96JE7 1060 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 SETDB2Q96T68 719 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 TUBGCP2Q9BSJ2 902 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 CUEDC2Q9H467 287 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 FAM217BQ9NTX9 383 aaPredicted RBP9.83□□□□□ -0.84
SMC6-207ENST00000448223 HPSEQ9Y251 543 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 H3BRJ5 948 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 M0R3G1 203 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 FOXP2O15409 715 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 STRNO43815 780 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 LCA5LO95447 670 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 IGBP1P78318 339 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 WASHC5Q12768 1159 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 SF3B3Q15393 1217 aaKnown RBP9.83□□□□□ -0.84
SMC6-207ENST00000448223 TRIM59Q8IWR1 403 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 EXOC8Q8IYI6 725 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 FBXL13Q8NEE6 735 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 ZC3H15Q8WU90 426 aaKnown RBP9.83□□□□□ -0.84
SMC6-207ENST00000448223 FNBP1Q96RU3 617 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 PRPF18Q99633 342 aaKnown RBP9.83□□□□□ -0.84
SMC6-207ENST00000448223 NT5C3AQ9H0P0 336 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 DCTN4Q9UJW0 460 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 MOCS3O95396 460 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 USP14P54578 494 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 KCNB1Q14721 858 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 NTRK3Q16288 839 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 ERFEQ4G0M1 354 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 SPATA21Q7Z572 469 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 STAG2Q8N3U4 1231 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 RNF26Q9BY78 433 aaPredicted RBP9.83□□□□□ -0.84
SMC6-207ENST00000448223 CCDC134Q9H6E4 229 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 LRWD1Q9UFC0 647 aa9.83□□□□□ -0.84
SMC6-207ENST00000448223 PRR23D1E9PI22 279 aaPredicted RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 PRR23D2P0DMB1 279 aaPredicted RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 ATF7P17544 494 aaPredicted RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 POLR2FP61218 127 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 LLGL1Q15334 1064 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 HERC4Q5GLZ8 1057 aaPredicted RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 PROCA1Q8NCQ7 364 aaPredicted RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 NAF1Q96HR8 494 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 RIOK1Q9BRS2 568 aaKnown RBP9.82□□□□□ -0.84
SMC6-207ENST00000448223 TRIM39Q9HCM9 518 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 RGPD2P0DJD1 1756 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 PCP4L1A6NKN8 68 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 H3BQF6 201 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 WNT7AO00755 349 aa9.82□□□□□ -0.84
SMC6-207ENST00000448223 ACSL3O95573 720 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms