RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 TCF7P36402 384 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ST3GAL1Q11201 340 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 SIX6OS1Q8N1H7 587 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 HAUS1Q96CS2 278 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 INTS2Q9H0H0 1204 aaKnown RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PXMP2Q9NR77 195 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 CDC23Q9UJX2 597 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PITPNM2Q9BZ72 1349 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 FTCDO95954 541 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 DGKDQ16760 1214 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 BSPRYQ5W0U4 402 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ERICH1Q86X53 443 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 NME8Q8N427 588 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ENGASEQ8NFI3 743 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PRDM10Q9NQV6 1147 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ATP8B3O60423 1300 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 HUS1O60921 280 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 RARBP10826 455 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ADCY8P40145 1251 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 CDC42EP1Q00587 391 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ZC2HC1CQ53FD0 456 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 LRRC71Q8N4P6 559 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 NSRP1Q9H0G5 558 aaKnown RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 IFT122Q9HBG6 1241 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 HSPBP1Q9NZL4 362 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 CPA4Q9UI42 421 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ZNF148Q9UQR1 794 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PIN4Q9Y237 131 aaKnown RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PDHXO00330 501 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 OATP04181 439 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 SLURP2P0DP57 97 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PTPRAP18433 802 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 RGS2P41220 211 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 GRB10Q13322 594 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 DRAP1Q14919 205 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 DUOXA2Q1HG44 320 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ERCC6LQ2NKX8 1250 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 GNASQ5JWF2 1037 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 SYT2Q8N9I0 419 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PDCD2LQ9BRP1 358 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PPANQ9NQ55 473 aaKnown RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 TTC26A0AVF1 554 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 CYTH3O43739 400 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 TBXAS1P24557 533 aaPredicted RBP7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ATP5DP30049 168 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 VGLL4Q14135 290 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 PCNX4Q63HM2 1172 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 FBXL13Q8NEE6 735 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 ZBED2Q9BTP6 218 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 SLC38A10Q9HBR0 1119 aa7.98□□□□□ -1.13
SYNE1-213ENST00000448038 MED24O75448 989 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 ACOT2P49753 483 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 PPATQ06203 517 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 LMBRD2Q68DH5 695 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 EFCAB12Q6NXP0 572 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 TRPM4Q8TD43 1214 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 MKL1Q969V6 931 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 KIF12Q96FN5 646 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 ACAP3Q96P50 834 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 KCPQ6ZWJ8 1503 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 KIAA0391O15091 583 aaKnown RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 CTSHP09668 335 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 TMEM62Q0P6H9 643 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 LLGL1Q15334 1064 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 RINT1Q6NUQ1 792 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 RFX6Q8HWS3 928 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 GDAP1L1Q96MZ0 367 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 P2RX7Q99572 595 aaKnown RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 DPH5Q9H2P9 285 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 A0A1W2PQC6 194 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 H7C0C1 242 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 ASAP2O43150 1006 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 TBC1D8O95759 1140 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 CXCR5P32302 372 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 ATP5OP48047 213 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 EVX2Q03828 476 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 IQCB1Q15051 598 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 KYAT1Q16773 422 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 Q4G0T1 1027 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 FAM76AQ8TAV0 307 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 MAGOHBQ96A72 148 aaKnown RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 ADAM22Q9P0K1 906 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 SEPT10Q9P0V9 454 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 EFCAB8A8MWE9 144 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 KBTBD13C9JR72 458 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 SLC16A3O15427 465 aaKnown RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 AP3M2P53677 418 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 IER5Q5VY09 327 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 PASD1Q8IV76 773 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 FBXO16Q8IX29 292 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 RPUSD2Q8IZ73 545 aaKnown RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 THEM5Q8N1Q8 247 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 TMEM35BQ8NCS4 154 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 GABPB2Q8TAK5 448 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 URGCPQ8TCY9 931 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 ASCC2Q9H1I8 757 aaPredicted RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 LIMA1Q9UHB6 759 aaKnown RBP7.97□□□□□ -1.13
SYNE1-213ENST00000448038 JRKLQ9Y4A0 524 aa7.97□□□□□ -1.13
SYNE1-213ENST00000448038 CYP11B2P19099 503 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms