RNA–Protein interactions for RNA: ENST00000447868.5

UFD1-204, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 596 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-204ENST00000447868 ASAP2O43150 1006 aa27.79■■■□□ 2.04
UFD1-204ENST00000447868 MUTP22033 750 aa27.79■■■□□ 2.04
UFD1-204ENST00000447868 GATMP50440 423 aa27.79■■■□□ 2.04
UFD1-204ENST00000447868 RESTQ13127 1097 aa27.79■■■□□ 2.04
UFD1-204ENST00000447868 BTG3Q14201 252 aaPredicted RBP27.79■■■□□ 2.04
UFD1-204ENST00000447868 CATSPER4Q7RTX7 472 aa27.79■■■□□ 2.04
UFD1-204ENST00000447868 ASAP3Q8TDY4 903 aa27.79■■■□□ 2.04
UFD1-204ENST00000447868 ZNF689Q96CS4 500 aaPredicted RBP27.79■■■□□ 2.04
UFD1-204ENST00000447868 DDX19AQ9NUU7 478 aaKnown RBP27.79■■■□□ 2.04
UFD1-204ENST00000447868 MTMR6Q9Y217 621 aa27.79■■■□□ 2.04
UFD1-204ENST00000447868 STX6O43752 255 aa27.78■■■□□ 2.04
UFD1-204ENST00000447868 MXD4Q14582 209 aaPredicted RBP27.78■■■□□ 2.04
UFD1-204ENST00000447868 SF3A1Q15459 793 aaKnown RBP27.78■■■□□ 2.04
UFD1-204ENST00000447868 ZRSR1Q15695 479 aaKnown RBP27.78■■■□□ 2.04
UFD1-204ENST00000447868 PAN2Q504Q3 1202 aaKnown RBP27.78■■■□□ 2.04
UFD1-204ENST00000447868 PADI6Q6TGC4 694 aa27.78■■■□□ 2.04
UFD1-204ENST00000447868 GDPD5Q8WTR4 605 aa27.78■■■□□ 2.04
UFD1-204ENST00000447868 POLR3FQ9H1D9 316 aaPredicted RBP27.78■■■□□ 2.04
UFD1-204ENST00000447868 GPRC5CQ9NQ84 441 aa27.78■■■□□ 2.04
UFD1-204ENST00000447868 COL4A4P53420 1690 aaPredicted RBP27.78■■■□□ 2.04
UFD1-204ENST00000447868 COL4A6Q14031 1691 aa27.78■■■□□ 2.04
UFD1-204ENST00000447868 NLRC5Q86WI3 1866 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 ARL2P36404 184 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 GRB10Q13322 594 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 ARL6IP4Q66PJ3 421 aaKnown RBP27.77■■■□□ 2.04
UFD1-204ENST00000447868 FAM173BQ6P4H8 233 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 SRGAP1Q7Z6B7 1085 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 SPRYD3Q8NCJ5 442 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 FBXO22Q8NEZ5 403 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 PPM1EQ8WY54 764 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 BHMT2Q9H2M3 363 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 MINDY3Q9H8M7 445 aa27.77■■■□□ 2.04
UFD1-204ENST00000447868 RNF216Q9NWF9 866 aaPredicted RBP27.77■■■□□ 2.04
UFD1-204ENST00000447868 PIN4Q9Y237 131 aaKnown RBP27.77■■■□□ 2.04
UFD1-204ENST00000447868 PHKA2P46019 1235 aa27.76■■■□□ 2.03
UFD1-204ENST00000447868 FAM189BP81408 668 aa27.76■■■□□ 2.03
UFD1-204ENST00000447868 TFDP1Q14186 410 aa27.76■■■□□ 2.03
UFD1-204ENST00000447868 FAM102BQ5T8I3 360 aa27.76■■■□□ 2.03
UFD1-204ENST00000447868 MICALL1Q8N3F8 863 aa27.76■■■□□ 2.03
UFD1-204ENST00000447868 MMTAG2Q9BU76 263 aaKnown RBP27.76■■■□□ 2.03
UFD1-204ENST00000447868 BMP15O95972 392 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 GLRA2P23416 452 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 CAPSQ13938 189 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 CCDC85BQ15834 202 aaPredicted RBP27.75■■■□□ 2.03
UFD1-204ENST00000447868 EPC2Q52LR7 807 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 TMEM192Q8IY95 271 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 CMTR2Q8IYT2 770 aaKnown RBP27.75■■■□□ 2.03
UFD1-204ENST00000447868 RNF169Q8NCN4 708 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 MCPH1Q8NEM0 835 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 SAMD11Q96NU1 681 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 CHST12Q9NRB3 414 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 TMEM161AQ9NX61 479 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 DACT1Q9NYF0 836 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 CLIC4Q9Y696 253 aa27.75■■■□□ 2.03
UFD1-204ENST00000447868 E9PMD0 336 aa27.74■■■□□ 2.03
UFD1-204ENST00000447868 GTPBP6O43824 516 aaPredicted RBP27.74■■■□□ 2.03
UFD1-204ENST00000447868 FGFR1P11362 822 aa27.74■■■□□ 2.03
UFD1-204ENST00000447868 TWF2Q6IBS0 349 aaKnown RBP27.74■■■□□ 2.03
UFD1-204ENST00000447868 ECHDC2Q86YB7 292 aa27.74■■■□□ 2.03
UFD1-204ENST00000447868 ELAC1Q9H777 363 aaKnown RBP27.74■■■□□ 2.03
UFD1-204ENST00000447868 DNM3Q9UQ16 869 aa27.74■■■□□ 2.03
UFD1-204ENST00000447868 MRPL42Q9Y6G3 142 aaKnown RBP27.74■■■□□ 2.03
UFD1-204ENST00000447868 RALGAPA2Q2PPJ7 1873 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 TBKBP1A7MCY6 615 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 LPXNO60711 386 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 CYP11B2P19099 503 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 CTNNB1P35222 781 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 PTENP60484 403 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 PLIN2Q99541 437 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 MTCH2Q9Y6C9 303 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 EYSQ5T1H1 3165 aa27.73■■■□□ 2.03
UFD1-204ENST00000447868 FNDC1Q4ZHG4 1894 aaPredicted RBP27.72■■■□□ 2.03
UFD1-204ENST00000447868 CEBPZQ03701 1054 aaKnown RBP27.72■■■□□ 2.03
UFD1-204ENST00000447868 POLD4Q9HCU8 107 aa27.72■■■□□ 2.03
UFD1-204ENST00000447868 AGPAT5Q9NUQ2 364 aa27.72■■■□□ 2.03
UFD1-204ENST00000447868 A0A0U1RQF3 1178 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 LRRIQ4A6NIV6 560 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 INO80B-WBP1J3KQ70 363 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 EYA4O95677 639 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 LINC00271P0C7V0 271 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 GRIN1Q05586 938 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 KCNK18Q7Z418 384 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 CDK5RAP3Q96JB5 506 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 PNMA5Q96PV4 448 aa27.71■■■□□ 2.03
UFD1-204ENST00000447868 ZSCAN16Q9H4T2 348 aaPredicted RBP27.71■■■□□ 2.03
UFD1-204ENST00000447868 KIAA1671Q9BY89 1806 aa27.7■■■□□ 2.02
UFD1-204ENST00000447868 ERLIN2O94905 339 aa27.7■■■□□ 2.02
UFD1-204ENST00000447868 POU5F1BQ06416 359 aa27.7■■■□□ 2.02
UFD1-204ENST00000447868 FOXD4L5Q5VV16 416 aaPredicted RBP27.7■■■□□ 2.02
UFD1-204ENST00000447868 CABP7Q86V35 215 aa27.7■■■□□ 2.02
UFD1-204ENST00000447868 FOXD4L4Q8WXT5 416 aaPredicted RBP27.7■■■□□ 2.02
UFD1-204ENST00000447868 CLP1Q92989 425 aaKnown RBP27.7■■■□□ 2.02
UFD1-204ENST00000447868 AK8Q96MA6 479 aa27.7■■■□□ 2.02
UFD1-204ENST00000447868 RWDD3Q9Y3V2 267 aa27.7■■■□□ 2.02
UFD1-204ENST00000447868 POU3F3P20264 500 aaPredicted RBP27.69■■■□□ 2.02
UFD1-204ENST00000447868 BMPR1AP36894 532 aa27.69■■■□□ 2.02
UFD1-204ENST00000447868 MBTD1Q05BQ5 628 aa27.69■■■□□ 2.02
UFD1-204ENST00000447868 GPM6BQ13491 265 aa27.69■■■□□ 2.02
UFD1-204ENST00000447868 PTPAQ15257 358 aa27.69■■■□□ 2.02
UFD1-204ENST00000447868 LONRF3Q496Y0 759 aa27.69■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms