RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 KHSRPQ92945 711 aaKnown RBP eCLIP12.17□□□□□ -0.46
SF3A1-203ENST00000444440 P2RX5Q93086 422 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 C8orf76Q96K31 380 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 NLRP4Q96MN2 994 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 HSD17B14Q9BPX1 270 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 LLPHQ9BRT6 129 aaKnown RBP12.17□□□□□ -0.46
SF3A1-203ENST00000444440 PLVAPQ9BX97 442 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 ELAC1Q9H777 363 aaKnown RBP12.17□□□□□ -0.46
SF3A1-203ENST00000444440 TTC12Q9H892 705 aaPredicted RBP12.17□□□□□ -0.46
SF3A1-203ENST00000444440 UPF2Q9HAU5 1272 aaKnown RBP12.17□□□□□ -0.46
SF3A1-203ENST00000444440 CD320Q9NPF0 282 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 RWDD3Q9Y3V2 267 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 C2orf16Q68DN1 1984 aa12.17□□□□□ -0.46
SF3A1-203ENST00000444440 MARCH6O60337 910 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 BAG4O95429 457 aaKnown RBP12.16□□□□□ -0.46
SF3A1-203ENST00000444440 SPATA31C1P0DKV0 1188 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 EMC2Q15006 297 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 LONRF3Q496Y0 759 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 TPH2Q8IWU9 490 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 COLGALT1Q8NBJ5 622 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 FBXO18Q8NFZ0 1043 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 POF1BQ8WVV4 589 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 PRPF31Q8WWY3 499 aaKnown RBP12.16□□□□□ -0.46
SF3A1-203ENST00000444440 LPPQ93052 612 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 PABPC5Q96DU9 382 aaKnown RBP12.16□□□□□ -0.46
SF3A1-203ENST00000444440 GCOM2Q9BZD3 368 aaPredicted RBP12.16□□□□□ -0.46
SF3A1-203ENST00000444440 LMAN2LQ9H0V9 348 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 ATP6V0A4Q9HBG4 840 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 PCDHA12Q9UN75 941 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 COL4A3BPQ9Y5P4 624 aa12.16□□□□□ -0.46
SF3A1-203ENST00000444440 PDCD11Q14690 1871 aaKnown RBP12.16□□□□□ -0.46
SF3A1-203ENST00000444440 A0A0U1RQF3 1178 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 TBX10O75333 385 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 MED24O75448 989 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 ZSCAN20P17040 1043 aaPredicted RBP12.15□□□□□ -0.46
SF3A1-203ENST00000444440 DNM2P50570 870 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 TOB1P50616 345 aaPredicted RBP12.15□□□□□ -0.46
SF3A1-203ENST00000444440 POLGP54098 1239 aaPredicted RBP12.15□□□□□ -0.46
SF3A1-203ENST00000444440 RBM10P98175 930 aaKnown RBP12.15□□□□□ -0.46
SF3A1-203ENST00000444440 ZNF174Q15697 407 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 AAK1Q2M2I8 961 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 LEXMQ3ZCV2 418 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 XKR9Q5GH70 373 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 ZNF410Q86VK4 478 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 C4orf32Q8N8J7 132 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 RNF169Q8NCN4 708 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 HELQQ8TDG4 1101 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 ASAP3Q8TDY4 903 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 PIGOQ8TEQ8 1089 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 ZSCAN31Q96LW9 406 aaPredicted RBP12.15□□□□□ -0.46
SF3A1-203ENST00000444440 TMEM117Q9H0C3 514 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 FOXP1Q9H334 677 aaPredicted RBP12.15□□□□□ -0.46
SF3A1-203ENST00000444440 ZSWIM4Q9H7M6 989 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 SH2B1Q9NRF2 756 aaPredicted RBP12.15□□□□□ -0.46
SF3A1-203ENST00000444440 CLDND1Q9NY35 253 aa12.15□□□□□ -0.46
SF3A1-203ENST00000444440 MTCL1Q9Y4B5 1905 aaKnown RBP12.15□□□□□ -0.46
SF3A1-203ENST00000444440 DENND4AQ7Z401 1863 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 B4GALT3O60512 393 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 FGF18O76093 207 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 LYPLA2O95372 231 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 GLP2RO95838 553 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 SRGAP2CP0DJJ0 459 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 RFC5P40937 340 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 PHKA2P46019 1235 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 RARRES1P49788 294 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 ERVFC1P60507 584 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 LAMTOR4Q0VGL1 99 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 CLUL1Q15846 466 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 SPOUT1Q5T280 376 aaKnown RBP12.14□□□□□ -0.47
SF3A1-203ENST00000444440 FERMT3Q86UX7 667 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 ZNF710Q8N1W2 664 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 IL27Q8NEV9 243 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 PSPC1Q8WXF1 523 aaKnown RBP12.14□□□□□ -0.47
SF3A1-203ENST00000444440 SLC7A3Q8WY07 619 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 PIN4Q9Y237 131 aaKnown RBP12.14□□□□□ -0.47
SF3A1-203ENST00000444440 CITO14578 2027 aa12.14□□□□□ -0.47
SF3A1-203ENST00000444440 VWA8A3KMH1 1905 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 GRXCR2A6NFK2 248 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 DKC1O60832 514 aaKnown RBP eCLIP12.13□□□□□ -0.47
SF3A1-203ENST00000444440 SFPQP23246 707 aaKnown RBP eCLIP12.13□□□□□ -0.47
SF3A1-203ENST00000444440 HOXA11P31270 313 aaPredicted RBP12.13□□□□□ -0.47
SF3A1-203ENST00000444440 TECP42680 631 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 AFF1P51825 1210 aaKnown RBP12.13□□□□□ -0.47
SF3A1-203ENST00000444440 HMGN5P82970 282 aaKnown RBP12.13□□□□□ -0.47
SF3A1-203ENST00000444440 CAPSQ13938 189 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 RABEP1Q15276 862 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 ECM1Q16610 540 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 NAALADL2Q58DX5 795 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 TTC38Q5R3I4 469 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 UBXN11Q5T124 520 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 TWF2Q6IBS0 349 aaKnown RBP12.13□□□□□ -0.47
SF3A1-203ENST00000444440 PTCRAQ6ISU1 281 aaPredicted RBP12.13□□□□□ -0.47
SF3A1-203ENST00000444440 EP400NLQ6ZTU2 488 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 CATSPER4Q7RTX7 472 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 TMEM173Q86WV6 379 aaPredicted RBP12.13□□□□□ -0.47
SF3A1-203ENST00000444440 CATSPER3Q86XQ3 398 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 NOSTRINQ8IVI9 506 aa12.13□□□□□ -0.47
SF3A1-203ENST00000444440 RNF149Q8NC42 400 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms