RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 MAEAQ7L5Y9 396 aa18.67■□□□□ 0.58
TSPAN9-204ENST00000444315 ZNF579Q8NAF0 562 aaKnown RBP18.67■□□□□ 0.58
TSPAN9-204ENST00000444315 ATXN2LQ8WWM7 1075 aaKnown RBP18.67■□□□□ 0.58
TSPAN9-204ENST00000444315 HLA-CQ95604 372 aa18.67■□□□□ 0.58
TSPAN9-204ENST00000444315 TUFT1Q9NNX1 390 aa18.67■□□□□ 0.58
TSPAN9-204ENST00000444315 GTF3C3Q9Y5Q9 886 aa18.67■□□□□ 0.58
TSPAN9-204ENST00000444315 IGKV6-21A0A0C4DH24 114 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 ARHGEF35A5YM69 484 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 ZBTB39O15060 712 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 ASAP2O43150 1006 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 DGAT1O75907 488 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 SKIP12755 728 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 POU3F3P20264 500 aaPredicted RBP18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 ZRSR1Q15695 479 aaKnown RBP18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 FAM102BQ5T8I3 360 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 THNSL1Q8IYQ7 743 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 RNF149Q8NC42 400 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 ZNF689Q96CS4 500 aaPredicted RBP18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 PLVAPQ9BX97 442 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 DHX33Q9H6R0 707 aaKnown RBP18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 LRWD1Q9UFC0 647 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 COG5Q9UP83 839 aa18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 FNDC1Q4ZHG4 1894 aaPredicted RBP18.66■□□□□ 0.58
TSPAN9-204ENST00000444315 A0A087WWV3 80 aa18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 VPS37CA5D8V6 355 aaPredicted RBP18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 U2AF2P26368 475 aaKnown RBP eCLIP18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 PTGDRQ13258 359 aa18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 MXD4Q14582 209 aaPredicted RBP18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 POTEGQ6S5H5 508 aa18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 ECHDC2Q86YB7 292 aa18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 PPP2R3CQ969Q6 453 aa18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 NACC1Q96RE7 527 aa18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 ELAC1Q9H777 363 aaKnown RBP18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 ALG13Q9NP73 1137 aaKnown RBP18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 CHST12Q9NRB3 414 aa18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 STK24Q9Y6E0 443 aa18.65■□□□□ 0.58
TSPAN9-204ENST00000444315 INO80B-WBP1J3KQ70 363 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 CA8P35219 290 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 DSC3Q14574 896 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 LONRF3Q496Y0 759 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 RILPL1Q5EBL4 403 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 DTHD1Q6ZMT9 781 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 SRGAP1Q7Z6B7 1085 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 FERMT3Q86UX7 667 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 LRRC43Q8N309 656 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 HELQQ8TDG4 1101 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 MICAL1Q8TDZ2 1067 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 SNX29Q8TEQ0 813 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 CLP1Q92989 425 aaKnown RBP18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 CEP89Q96ST8 783 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 HSD17B14Q9BPX1 270 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 BACH2Q9BYV9 841 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 TMEM117Q9H0C3 514 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 LMAN2LQ9H0V9 348 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 POLR3FQ9H1D9 316 aaPredicted RBP18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 NSUN3Q9H649 340 aaKnown RBP18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 RC3H2Q9HBD1 1191 aaKnown RBP18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 PCDHB6Q9Y5E3 794 aa18.64■□□□□ 0.57
TSPAN9-204ENST00000444315 TRANK1O15050 2925 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 LRRIQ4A6NIV6 560 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 MED24O75448 989 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 LYPLA2O95372 231 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 LAG3P18627 525 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 RARRES1P49788 294 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 RAB27AP51159 221 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 TFF2Q03403 129 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 RNASELQ05823 741 aaKnown RBP18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 KRT79Q5XKE5 535 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 CATSPER3Q86XQ3 398 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 KLHL23Q8NBE8 558 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 CDK5RAP3Q96JB5 506 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 ASB2Q96Q27 587 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 POLR3CQ9BUI4 534 aaPredicted RBP18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 INPP5FQ9Y2H2 1132 aa18.63■□□□□ 0.57
TSPAN9-204ENST00000444315 UNC80Q8N2C7 3258 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 PRUNE2Q8WUY3 3088 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 C5orf67F2Z3F1 127 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 LAD1O00515 517 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 GRM6O15303 877 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 CSPP1Q1MSJ5 1256 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 NAALADL2Q58DX5 795 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 TCEAL5Q5H9L2 206 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 ZBTB8OSQ8IWT0 167 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 MCPH1Q8NEM0 835 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 PGBD4Q96DM1 585 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 COL25A1Q9BXS0 654 aaPredicted RBP18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 MRPL9Q9BYD2 267 aaKnown RBP18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 TRIM6Q9C030 488 aaPredicted RBP18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 IGFLR1Q9H665 355 aa18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 TYW1Q9NV66 732 aaKnown RBP18.62■□□□□ 0.57
TSPAN9-204ENST00000444315 A0A0U1RQF3 1178 aa18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 EOMESO95936 686 aa18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 XRCC6P12956 609 aaKnown RBP eCLIP18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 LIG1P18858 919 aa18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 PDCP20941 246 aa18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 RPA1P27694 616 aa18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 FXR2P51116 673 aaKnown RBP eCLIP18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 GLB1LQ6UWU2 654 aa18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 RASSF8Q8NHQ8 419 aa18.61■□□□□ 0.57
TSPAN9-204ENST00000444315 URGCPQ8TCY9 931 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms