RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 FRMD4BQ9Y2L6 1034 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 PCDH11YQ9BZA8 1340 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ARHGAP42A6NI28 874 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 KIAA0391O15091 583 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 PTENP60484 403 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 SLC34A1Q06495 639 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ZNF211Q13398 564 aaPredicted RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 RNF220Q5VTB9 566 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 GSTA5Q7RTV2 222 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ATP8B4Q8TF62 1192 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 MRRFQ96E11 262 aaKnown RBP5.39□□□□□ -1.55
HERC1-201ENST00000443617 CCDC87Q9NVE4 849 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 ANKFY1Q9P2R3 1169 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 TBK1Q9UHD2 729 aa5.39□□□□□ -1.55
HERC1-201ENST00000443617 CYP2D7A0A087X1C5 515 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 SLC45A4Q5BKX6 768 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 ZC3H12AQ5D1E8 599 aaKnown RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 FITM2Q8N6M3 262 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 CKAP2Q8WWK9 683 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 PTPRN2Q92932 1015 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 DGCR14Q96DF8 476 aaKnown RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 ZNF512BQ96KM6 892 aaPredicted RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 CNPY1Q3B7I2 92 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 TMEM259Q4ZIN3 620 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 NAALADL2Q58DX5 795 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 ZFYVE27Q5T4F4 411 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 RAD54LQ92698 747 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 SPHKAPQ2M3C7 1700 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 MAGEA8P43361 318 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 GPBP1Q86WP2 473 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 MAML3Q96JK9 1138 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 KNDC1Q76NI1 1749 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 RASA4BC9J798 803 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 RASA4O43374 803 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 PTPN4P29074 926 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 CAV1Q03135 178 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 C18orf8Q96DM3 657 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 PHACTR1Q9C0D0 580 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 ARHGEF10LQ9HCE6 1279 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 PLS3P13797 630 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 BRAFP15056 766 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 SERPINB3P29508 390 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 LENG1Q96BZ8 264 aaPredicted RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 SPATA16Q9BXB7 569 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 MMADHCQ9H3L0 296 aaPredicted RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 MST1RQ04912 1400 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 A0A0A6YYK5 440 aaPredicted RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 ARHGAP10A1A4S6 786 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 XRCC5P13010 732 aaKnown RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 RASSF3Q86WH2 238 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 ENDOVQ8N8Q3 282 aaKnown RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 ZBTB38Q8NAP3 1195 aaPredicted RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 GCNT4Q9P109 453 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 WHRNQ9P202 907 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 RPS6KL1Q9Y6S9 549 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 ABCB11O95342 1321 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 RARGP13631 454 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 SEPT6Q14141 434 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 ASRGL1Q7L266 308 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 LCORLQ8N3X6 602 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 DDX3XO00571 662 aaKnown RBP eCLIP5.38□□□□□ -1.554e-9■□□□□ 9.5
HERC1-201ENST00000443617 FAM26FQ5R3K3 315 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 MKNK2Q9HBH9 465 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 ITGB1BP2Q9UKP3 347 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 TTC7AQ9ULT0 858 aaPredicted RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 FAM170AA1A519 330 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 ATP2A1O14983 1001 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 MT-ND3P03897 115 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 TUBP50607 506 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 TNFRSF25Q93038 417 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 GALNT8Q9NY28 637 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 QRICH2Q9H0J4 1663 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 MYO5CQ9NQX4 1742 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 COPB2P35606 906 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 TMED2Q15363 201 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 KCTD19Q17RG1 926 aaPredicted RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 REXO1Q8N1G1 1221 aaKnown RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 IRS4O14654 1257 aaPredicted RBP5.38□□□□□ -1.55
HERC1-201ENST00000443617 EPHB2P29323 1055 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 PREX2Q70Z35 1606 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 WDR91A4D1P6 747 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 BBOF1Q8ND07 529 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 TMEM237Q96Q45 408 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 LMCD1Q9NZU5 365 aa5.38□□□□□ -1.55
HERC1-201ENST00000443617 SMCO2A6NFE2 343 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 DENND2DQ9H6A0 471 aaPredicted RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 PREBQ9HCU5 417 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 CDC42BPGQ6DT37 1551 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 NMT2O60551 498 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 ATP6V1G1O75348 118 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 FUT2Q10981 343 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 MAP7D1Q3KQU3 841 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 MMEL1Q495T6 779 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 TAF1BQ53T94 588 aaPredicted RBP5.37□□□□□ -1.55
HERC1-201ENST00000443617 LRRC55Q6ZSA7 311 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 VWDEQ8N2E2 1590 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 C4orf32Q8N8J7 132 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 MYO3AQ8NEV4 1616 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 CCDC110Q8TBZ0 833 aa5.37□□□□□ -1.55
HERC1-201ENST00000443617 NAT14Q8WUY8 206 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms