RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 SZT2Q5T011 3432 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-211ENST00000443563 TLL1O43897 1013 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 GJB5O95377 273 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 SSBP05455 408 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDAC6-211ENST00000443563 PLA2G4BP0C869 781 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 STAG3L1P0CL83 205 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 DNAJB2P25686 324 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 DEFB103AP81534 67 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 GRIN1Q05586 938 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 FAM109BQ6ICB4 259 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-211ENST00000443563 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
HDAC6-211ENST00000443563 CCDC73Q6ZRK6 1079 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 MAEAQ7L5Y9 396 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 CATSPER4Q7RTX7 472 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 KSR1Q8IVT5 923 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 ZBTB8OSQ8IWT0 167 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 SYMPKQ92797 1274 aaKnown RBP12.01□□□□□ -0.49
HDAC6-211ENST00000443563 TOP1MTQ969P6 601 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 ZNF668Q96K58 619 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-211ENST00000443563 DRC1Q96MC2 740 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 CLIC6Q96NY7 704 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 RAD9AQ99638 391 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 PBX4Q9BYU1 374 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 POLR3FQ9H1D9 316 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-211ENST00000443563 C2orf40Q9H1Z8 148 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 TSPYL2Q9H2G4 693 aaPredicted RBP12.01□□□□□ -0.49
HDAC6-211ENST00000443563 IFT122Q9HBG6 1241 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 CHST12Q9NRB3 414 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 RGS18Q9NS28 235 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 DACT1Q9NYF0 836 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 STK17AQ9UEE5 414 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 ZDHHC9Q9Y397 364 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 INSL6Q9Y581 213 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 MYH11P35749 1972 aa12.01□□□□□ -0.49
HDAC6-211ENST00000443563 SOX1O00570 391 aaPredicted RBP12□□□□□ -0.49
HDAC6-211ENST00000443563 PLCG1P19174 1290 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 NCLP19338 710 aaKnown RBP12□□□□□ -0.49
HDAC6-211ENST00000443563 GLRA2P23416 452 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 GUCY2CP25092 1073 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 AXLP30530 894 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 NAMPTP43490 491 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 ME1P48163 572 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 SARSP49591 514 aaKnown RBP12□□□□□ -0.49
HDAC6-211ENST00000443563 SLC12A3P55017 1021 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 PTENP60484 403 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 DNM1Q05193 864 aaKnown RBP12□□□□□ -0.49
HDAC6-211ENST00000443563 CAPSQ13938 189 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 KARSQ15046 597 aaKnown RBP12□□□□□ -0.49
HDAC6-211ENST00000443563 ZNF697Q5TEC3 545 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 RRAGBQ5VZM2 374 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 RINT1Q6NUQ1 792 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 SLC24A5Q71RS6 500 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 IFNLR1Q8IU57 520 aaPredicted RBP12□□□□□ -0.49
HDAC6-211ENST00000443563 TIFAQ96CG3 184 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 LRCH3Q96II8 777 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 EPSTI1Q96J88 318 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 PLIN2Q99541 437 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 ADAM2Q99965 735 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 SCAND2PQ9GZW5 306 aaPredicted RBP12□□□□□ -0.49
HDAC6-211ENST00000443563 TMX1Q9H3N1 280 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 C17orf75Q9HAS0 396 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 RCOR1Q9UKL0 485 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 LRFN2Q9ULH4 789 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 PHLPP2Q6ZVD8 1323 aa12□□□□□ -0.49
HDAC6-211ENST00000443563 LRRIQ4A6NIV6 560 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 GRXCR1A8MXD5 290 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 ERLIN2O94905 339 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 UPP2O95045 317 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 SKIP12755 728 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 DDIT3P35638 169 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 SPECC1Q5M775 1068 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 C1orf186Q6ZWK4 172 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 KCNK18Q7Z418 384 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 NPAS4Q8IUM7 802 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 ASAP3Q8TDY4 903 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 LARP4BQ92615 738 aaKnown RBP11.99□□□□□ -0.49
HDAC6-211ENST00000443563 RAD54LQ92698 747 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 SPATA32Q96LK8 384 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 PYM1Q9BRP8 204 aaKnown RBP11.99□□□□□ -0.49
HDAC6-211ENST00000443563 SLC28A3Q9HAS3 691 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 GPRC5CQ9NQ84 441 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 FAM13BQ9NYF5 915 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 CIZ1Q9ULV3 898 aaPredicted RBP11.99□□□□□ -0.49
HDAC6-211ENST00000443563 PCDHB7Q9Y5E2 793 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 TTC3P53804 2025 aa11.99□□□□□ -0.49
HDAC6-211ENST00000443563 CHD7Q9P2D1 2997 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 TCHHQ07283 1943 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 COL4A6Q14031 1691 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 INO80B-WBP1J3KQ70 363 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 HIP1RO75146 1068 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 CSDE1O75534 798 aaKnown RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 FGFR4P22455 802 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 EFNA5P52803 228 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 RABGGTBP53611 331 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 HTRA4P83105 476 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 DMP1Q13316 513 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 DSC3Q14574 896 aa11.98□□□□□ -0.49
HDAC6-211ENST00000443563 CDCA2Q69YH5 1023 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-211ENST00000443563 USP49Q70CQ1 688 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms