RNA–Protein interactions for RNA: ENST00000443503.6

CTDSPL-206, Transcript of CTD small phosphatase like, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CTDSPL, Length 4,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-206ENST00000443503 ZWILCHQ9H900 591 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 IFT122Q9HBG6 1241 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 SLC38A10Q9HBR0 1119 aa24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 SCAF8Q9UPN6 1271 aaKnown RBP24.07■■□□□ 1.44
CTDSPL-206ENST00000443503 HMGB1P1B2RPK0 211 aaPredicted RBP24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 PSMD6Q15008 389 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 CDO1Q16878 200 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 ZNF564Q8TBZ8 553 aaPredicted RBP24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 FAM167AQ96KS9 214 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 SNX12Q9UMY4 172 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 ZNF185O15231 689 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 RSRC2Q7L4I2 434 aaKnown RBP24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 LRRC4Q9HBW1 653 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 TBX3O15119 743 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 SMARCA1P28370 1054 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 SOX5P35711 763 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 ZNF568Q3ZCX4 644 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 PSMA2P25787 234 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 ITKQ08881 620 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 MTMR2Q13614 643 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 CATSPER4Q7RTX7 472 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 NBPF3Q9H094 633 aa24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 POLR3FQ9H1D9 316 aaPredicted RBP24.06■■□□□ 1.44
CTDSPL-206ENST00000443503 TSNAXIP1Q2TAA8 658 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 RFFLQ8WZ73 363 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 CFAP57Q96MR6 1250 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 MTRQ99707 1265 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 TCRBV5S4A2TA0A5A2 114 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 AP5Z1O43299 807 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 SLC18A3Q16572 532 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 FAM193BQ96PV7 902 aaPredicted RBP24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 VCPKMTQ9H867 229 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 DIS3Q9Y2L1 958 aaKnown RBP24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 SPATA31A6Q5VVP1 1343 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 AK9Q5TCS8 1911 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 FDX1P10109 184 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 ARL4AP40617 200 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 MSH2P43246 934 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 NFIAQ12857 509 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 SPOUT1Q5T280 376 aaKnown RBP24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 LMNTD2Q8IXW0 634 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 NUP85Q9BW27 656 aa24.05■■□□□ 1.44
CTDSPL-206ENST00000443503 HNRNPH2P55795 449 aaKnown RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 ARHGEF18Q6ZSZ5 1173 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 C3orf67Q6ZVT6 689 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 ELOA2Q8IYF1 753 aaPredicted RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 FBXL13Q8NEE6 735 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.04■■□□□ 1.449e-6■□□□□ 9.3
CTDSPL-206ENST00000443503 POLLQ9UGP5 575 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 ANKRD65E5RJM6 399 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 UCHL3P15374 230 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 CD44P16070 742 aaKnown RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 YWHABP31946 246 aaKnown RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 BAATQ14032 418 aaPredicted RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 CNOT10Q9H9A5 744 aaKnown RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 ZNF70Q9UC06 446 aaPredicted RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 KLK7P49862 253 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 CLNS1AP54105 237 aaKnown RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 LMBRD2Q68DH5 695 aaPredicted RBP24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 SSU72P8A0A1W2PR75 194 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 MYBP10242 640 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 ZNF699Q32M78 642 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 PDIK1LQ8N165 341 aa24.04■■□□□ 1.44
CTDSPL-206ENST00000443503 FXR2P51116 673 aaKnown RBP eCLIP24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 CCHCR1Q8TD31 782 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 RNF25Q96BH1 459 aaPredicted RBP24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 SLC37A4O43826 429 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 GMNNO75496 209 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 FAM151AQ8WW52 585 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 OTUD5Q96G74 571 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 CPP00450 1065 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 SLC9A1P19634 815 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 RSPH3Q86UC2 560 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 ZNF18P17022 549 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 OR6B3Q8NGW1 331 aa24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 NOC2LQ9Y3T9 749 aaKnown RBP24.03■■□□□ 1.44
CTDSPL-206ENST00000443503 NFX1Q12986 1120 aaKnown RBP24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 EDRF1Q3B7T1 1238 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 ZC2HC1CQ53FD0 456 aaPredicted RBP24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 LRRC1Q9BTT6 524 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 PNMA3Q9UL41 463 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 ARHGAP42A6NI28 874 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 GYS1P13807 737 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 RPA1P27694 616 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 SPATA24Q86W54 205 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 APOBEC3FQ8IUX4 373 aaKnown RBP24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 NWD1Q149M9 1564 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 CA4P22748 312 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 C6orf118Q5T5N4 469 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 RHPN2Q8IUC4 686 aa24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 MORC2Q9Y6X9 1032 aaPredicted RBP24.02■■□□□ 1.44
CTDSPL-206ENST00000443503 PPP6R3Q5H9R7 873 aaPredicted RBP24.01■■□□□ 1.43
CTDSPL-206ENST00000443503 COG1Q8WTW3 980 aa24.01■■□□□ 1.43
CTDSPL-206ENST00000443503 SCYL1Q96KG9 808 aa24.01■■□□□ 1.43
CTDSPL-206ENST00000443503 DNAJC5Q9H3Z4 198 aa24.01■■□□□ 1.43
CTDSPL-206ENST00000443503 EFCC1Q9HA90 598 aa24.01■■□□□ 1.43
CTDSPL-206ENST00000443503 RBAKQ9NYW8 714 aaPredicted RBP24.01■■□□□ 1.43
CTDSPL-206ENST00000443503 SLC9A2Q9UBY0 812 aa24.01■■□□□ 1.43
CTDSPL-206ENST00000443503 NYAP1Q6ZVC0 841 aa24.01■■□□□ 1.43
CTDSPL-206ENST00000443503 DNAAF3Q8N9W5 541 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms