RNA–Protein interactions for RNA: ENST00000442714.5

HDLBP-219, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-219ENST00000442714 GCOM2Q9BZD3 368 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-219ENST00000442714 TM6SF1Q9BZW5 370 aa11.43□□□□□ -0.58
HDLBP-219ENST00000442714 DACT1Q9NYF0 836 aa11.43□□□□□ -0.58
HDLBP-219ENST00000442714 SUCLA2Q9P2R7 463 aaPredicted RBP11.43□□□□□ -0.58
HDLBP-219ENST00000442714 TECTAO75443 2155 aa11.43□□□□□ -0.58
HDLBP-219ENST00000442714 A0A087WZ62 844 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 TMEM150BA6NC51 233 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 EML1O00423 815 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 ZNF623O75123 536 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 DEXIO95424 95 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 TDP2O95551 362 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 CXCL14O95715 111 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 PHKA2P46019 1235 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 ALDH7A1P49419 539 aaKnown RBP11.42□□□□□ -0.58
HDLBP-219ENST00000442714 DNM2P50570 870 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 BCAR1P56945 870 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 MOXD1Q6UVY6 613 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 TRIM22Q8IYM9 498 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 ABI1Q8IZP0 508 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 LRRC43Q8N309 656 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 DAGLBQ8NCG7 672 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 RNF169Q8NCN4 708 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 HELQQ8TDG4 1101 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 AIFM3Q96NN9 605 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 SH2D3AQ9BRG2 576 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 FDXACB1Q9BRP7 624 aaPredicted RBP11.42□□□□□ -0.58
HDLBP-219ENST00000442714 ADAM7Q9H2U9 754 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 CYP46A1Q9Y6A2 500 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 ZDBF2Q9HCK1 2354 aa11.42□□□□□ -0.58
HDLBP-219ENST00000442714 NT5C1B-RDH14C9J2C7 533 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 CLASP2O75122 1294 aaKnown RBP11.41□□□□□ -0.58
HDLBP-219ENST00000442714 OFD1O75665 1012 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 MRE11P49959 708 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 PSMC5P62195 406 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 SIGLEC14Q08ET2 396 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 MTERF2Q49AM1 385 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 LLGL2Q6P1M3 1020 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 MRPL10Q7Z7H8 261 aaKnown RBP11.41□□□□□ -0.58
HDLBP-219ENST00000442714 KSR1Q8IVT5 923 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 ZNF579Q8NAF0 562 aaKnown RBP11.41□□□□□ -0.58
HDLBP-219ENST00000442714 ASIC4Q96FT7 647 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 INO80BQ9C086 356 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-219ENST00000442714 IFT122Q9HBG6 1241 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 ENTPD7Q9NQZ7 604 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 IRAK3Q9Y616 596 aa11.41□□□□□ -0.58
HDLBP-219ENST00000442714 ZFHX2Q9C0A1 2572 aaPredicted RBP11.41□□□□□ -0.58
HDLBP-219ENST00000442714 RALGAPA2Q2PPJ7 1873 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 CACNA1HO95180 2353 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 CPLX1O14810 134 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 GALTP07902 379 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 SRGAP2BP0DMP2 458 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 SKIP12755 728 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 ITIH3Q06033 890 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 PPP2R5CQ13362 524 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 SMC1AQ14683 1233 aaKnown RBP11.4□□□□□ -0.58
HDLBP-219ENST00000442714 NONOQ15233 471 aaKnown RBP eCLIP11.4□□□□□ -0.587e-7■■■■■ 27.4
HDLBP-219ENST00000442714 INF2Q27J81 1249 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 PPP4R3AQ6IN85 833 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 DDX53Q86TM3 631 aaKnown RBP11.4□□□□□ -0.58
HDLBP-219ENST00000442714 ZNF410Q86VK4 478 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 FBXL6Q8N531 539 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 PRPF31Q8WWY3 499 aaKnown RBP11.4□□□□□ -0.58
HDLBP-219ENST00000442714 RSPH1Q8WYR4 309 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 HAS1Q92839 578 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 CASP10Q92851 521 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 FAM20AQ96MK3 541 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 SCLT1Q96NL6 688 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 PHF20Q9BVI0 1012 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 APOL5Q9BWW9 433 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 MRPL9Q9BYD2 267 aaKnown RBP11.4□□□□□ -0.58
HDLBP-219ENST00000442714 KCNMB3Q9NPA1 279 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
HDLBP-219ENST00000442714 DDX25Q9UHL0 483 aaKnown RBP11.4□□□□□ -0.58
HDLBP-219ENST00000442714 KCNJ14Q9UNX9 436 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 HCFC2Q9Y5Z7 792 aa11.4□□□□□ -0.58
HDLBP-219ENST00000442714 MEIS3P2A8K0S8 358 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 SLC37A4O43826 429 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 SFPQP23246 707 aaKnown RBP eCLIP11.39□□□□□ -0.598e-6■□□□□ 9
HDLBP-219ENST00000442714 HOXA11P31270 313 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-219ENST00000442714 QARSP47897 775 aaKnown RBP11.39□□□□□ -0.59
HDLBP-219ENST00000442714 POLGP54098 1239 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-219ENST00000442714 NPEPPSP55786 919 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 PTPN21Q16825 1174 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 LONRF3Q496Y0 759 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 NOMO2Q5JPE7 1267 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 KRT25Q7Z3Z0 450 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 TMEM173Q86WV6 379 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-219ENST00000442714 ZNF280BQ86YH2 543 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 VPS52Q8N1B4 723 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 PRSS33Q8NF86 280 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 SLC22A17Q8WUG5 538 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 LPPQ93052 612 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 IGSF21Q96ID5 467 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 JPH2Q9BR39 696 aaPredicted RBP11.39□□□□□ -0.59
HDLBP-219ENST00000442714 NRDE2Q9H7Z3 1164 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 CYP26B1Q9NR63 512 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 PDRG1Q9NUG6 133 aa11.39□□□□□ -0.59
HDLBP-219ENST00000442714 FAM105AQ9NUU6 356 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms