RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 KCNMA1Q12791 1236 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 SLC18A3Q16572 532 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 C1orf228Q6PIY5 440 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 TRIM59Q8IWR1 403 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 GALNT4Q8N4A0 578 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 TSEN2Q8NCE0 465 aaKnown RBP10.99□□□□□ -0.65
LIN54-202ENST00000442461 SNF8Q96H20 258 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 ZNF594Q96JF6 807 aaPredicted RBP10.99□□□□□ -0.65
LIN54-202ENST00000442461 FAM81BQ96LP2 452 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 CCDC90BQ9GZT6 254 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 PCDHA12Q9UN75 941 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 AK9Q5TCS8 1911 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 GRIN2AQ12879 1464 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 GLI1P08151 1106 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 KCNJ2P63252 427 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 GSTO1P78417 241 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 ATP1A4Q13733 1029 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 WLSQ5T9L3 541 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 SFR1Q86XK3 245 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 ZFRQ96KR1 1074 aaKnown RBP10.99□□□□□ -0.65
LIN54-202ENST00000442461 SERPINB12Q96P63 405 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 CC2D2AQ9P2K1 1620 aa10.99□□□□□ -0.65
LIN54-202ENST00000442461 ARHGEF35A5YM69 484 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 DPPA5A6NC42 116 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 LRRN2O75325 713 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 NPTXRO95502 500 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 TFRCP02786 760 aaKnown RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 MAGEA8P43361 318 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 ARL4CP56559 192 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 GSTA3Q16772 222 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 MARK2Q7KZI7 788 aaKnown RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 TMC4Q7Z404 712 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 ZSCAN10Q96SZ4 725 aaPredicted RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 MRPL1Q9BYD6 325 aaKnown RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 LACRTQ9GZZ8 138 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 PHTF1Q9UMS5 762 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 EXOC7Q9UPT5 735 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 KIF28PB7ZC32 967 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 PLCG1P19174 1290 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 RAB27AP51159 221 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 DAB2P98082 770 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 IL1RL1Q01638 556 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 LBRQ14739 615 aaKnown RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 TRMT5Q32P41 509 aaKnown RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 TTBK2Q6IQ55 1244 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 LRRC8BQ6P9F7 803 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 IYDQ6PHW0 289 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 KCNV1Q6PIU1 500 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 POTEEQ6S8J3 1075 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 DPH6Q7L8W6 267 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 TRIM63Q969Q1 353 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 AIPL1Q9NZN9 384 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 MID2Q9UJV3 735 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 CUL7Q14999 1698 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 KRT38O76015 456 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 SEC24DO94855 1032 aaPredicted RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 PTDSS1P48651 473 aaKnown RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 POLGP54098 1239 aaPredicted RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 DEFA1P59665 94 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 DEFA3P59666 94 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 PLEKHA7Q6IQ23 1121 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 JAMLQ86YT9 394 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 PROM2Q8N271 834 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 SUPT20HQ8NEM7 779 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 HDAC7Q8WUI4 952 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 ANKS1AQ92625 1134 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 CNBD2Q96M20 576 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 NRDE2Q9H7Z3 1164 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 ABCF3Q9NUQ8 709 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 ZNF212Q9UDV6 495 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 TRIM33Q9UPN9 1127 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 SYNMO15061 1565 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 PLB1Q6P1J6 1458 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 KPNA4O00629 521 aaPredicted RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 CPA2P48052 419 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 LPCAT2Q7L5N7 544 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 ADCK1Q86TW2 530 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 PROCA1Q8NCQ7 364 aaPredicted RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 ATXN2LQ8WWM7 1075 aaKnown RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 ALKBH8Q96BT7 664 aaKnown RBP10.98□□□□□ -0.65
LIN54-202ENST00000442461 PPP1R14BQ96C90 147 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 MAGEB18Q96M61 343 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 DACH2Q96NX9 599 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 SYBUQ9NX95 663 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 ADA2Q9NZK5 511 aa10.98□□□□□ -0.65
LIN54-202ENST00000442461 TOPBP1Q92547 1522 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 RASSF9O75901 435 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 HSPA4LO95757 839 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 CAPN1P07384 714 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 ECE1P42892 770 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 ALDH18A1P54886 795 aaKnown RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 MDH1BQ5I0G3 518 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 CD302Q8IX05 232 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 ELOA2Q8IYF1 753 aaPredicted RBP10.97□□□□□ -0.65
LIN54-202ENST00000442461 RFFLQ8WZ73 363 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 BEGAINQ9BUH8 593 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 KLHL4Q9C0H6 718 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 CAPN6Q9Y6Q1 641 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 F8VZ95 297 aa10.97□□□□□ -0.65
LIN54-202ENST00000442461 SCNN1BP51168 640 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms