RNA–Protein interactions for RNA: ENST00000442216.1

CSNK1E-210, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 787 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-210ENST00000442216 ZBED2Q9BTP6 218 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 TIPINQ9BVW5 301 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 KCND2Q9NZV8 630 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 CFAP45Q9UL16 551 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 RALGAPA2Q2PPJ7 1873 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 NLRC5Q86WI3 1866 aa16.69■□□□□ 0.26
CSNK1E-210ENST00000442216 FNDC1Q4ZHG4 1894 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 DENND3A2RUS2 1198 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 STAG3L1P0CL83 205 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 SRGAP2CP0DJJ0 459 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 ZSCAN20P17040 1043 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 GLRA2P23416 452 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 SARSP49591 514 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 PTENP60484 403 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 FOXD4L5Q5VV16 416 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 SLC24A5Q71RS6 500 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 KCNK18Q7Z418 384 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 CRIPAKQ8N1N5 446 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 SYT2Q8N9I0 419 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 FOXD4L4Q8WXT5 416 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 KIFAP3Q92845 792 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 ADAM2Q99965 735 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 POLR3FQ9H1D9 316 aaPredicted RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 SLC28A3Q9HAS3 691 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 DACT1Q9NYF0 836 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 TFIP11Q9UBB9 837 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 CCDC39Q9UFE4 941 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 YBX2Q9Y2T7 364 aaKnown RBP16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 ATP6V1DQ9Y5K8 247 aa16.68■□□□□ 0.26
CSNK1E-210ENST00000442216 C9IYK1 514 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 MGEA5O60502 916 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 TXLNAP40222 546 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 CAPSQ13938 189 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 PPP2R5AQ15172 486 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 ZRSR1Q15695 479 aaKnown RBP16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 FAM102BQ5T8I3 360 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 RINT1Q6NUQ1 792 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 C1orf186Q6ZWK4 172 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 NPAS4Q8IUM7 802 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 KCNG4Q8TDN1 519 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 ASAP3Q8TDY4 903 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 TRAIPQ9BWF2 469 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 NKX2-4Q9H2Z4 354 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 ELAC1Q9H777 363 aaKnown RBP16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 ZDHHC9Q9Y397 364 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 MYO9BQ13459 2157 aa16.67■□□□□ 0.26
CSNK1E-210ENST00000442216 GUCY2CP25092 1073 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 SLC12A3P55017 1021 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 FAM189BP81408 668 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 CATSPER4Q7RTX7 472 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 DEFB123Q8N688 67 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 RASSF8Q8NHQ8 419 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 SP7Q8TDD2 431 aaPredicted RBP16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 SYMPKQ92797 1274 aaKnown RBP16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 EPSTI1Q96J88 318 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 CLIC6Q96NY7 704 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 TTYH1Q9H313 450 aaPredicted RBP16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 SEMA6BQ9H3T3 888 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 ZNF576Q9H609 170 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 C17orf75Q9HAS0 396 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 GPRC5CQ9NQ84 441 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 DAXXQ9UER7 740 aaPredicted RBP16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 KCNG1Q9UIX4 513 aa16.66■□□□□ 0.26
CSNK1E-210ENST00000442216 CUTAO60888 179 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 CSDE1O75534 798 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 UPP2O95045 317 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 CA3P07451 260 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 PLA2G4BP0C869 781 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 MYOGP15173 224 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 PLCG1P19174 1290 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 AXLP30530 894 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 NAMPTP43490 491 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 NUCB2P80303 420 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 KARSQ15046 597 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 PPP2R2DQ66LE6 453 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 CDCA2Q69YH5 1023 aaPredicted RBP16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 MAEAQ7L5Y9 396 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 TMCO2Q7Z6W1 182 aaPredicted RBP16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 IFT74Q96LB3 600 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 DRC1Q96MC2 740 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 PLIN2Q99541 437 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 C2orf40Q9H1Z8 148 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 MINDY3Q9H8M7 445 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 RC3H2Q9HBD1 1191 aaKnown RBP16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 BLOC1S4Q9NUP1 217 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 AGPAT5Q9NUQ2 364 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 STK17AQ9UEE5 414 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 RCOR1Q9UKL0 485 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 LAMA3Q16787 3333 aa16.65■□□□□ 0.26
CSNK1E-210ENST00000442216 A0A0U1RQF3 1178 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 RBAK-RBAKDNI3L0D1 243 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 DGKIO75912 1065 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 SKIP12755 728 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 FGFR4P22455 802 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 DDIT3P35638 169 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 DNM1Q05193 864 aaKnown RBP16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 NCBP1Q09161 790 aaKnown RBP16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 SPECC1Q5M775 1068 aa16.64■□□□□ 0.25
CSNK1E-210ENST00000442216 FAM117BQ6P1L5 589 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms