RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 PNKPQ96T60 521 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 GCOM2Q9BZD3 368 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 SH3GLB2Q9NR46 395 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 MAGEB2O15479 319 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 ARP10275 920 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 INSRRP14616 1297 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 USP11P51784 963 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 IRX5P78411 483 aaPredicted RBP8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 RAD51AP2Q09MP3 1159 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 LRRC26Q2I0M4 334 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 PAN2Q504Q3 1202 aaKnown RBP8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 IL31RAQ8NI17 732 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 NAA15Q9BXJ9 866 aaKnown RBP8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 PARD6BQ9BYG5 372 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 SEZ6LQ9BYH1 1024 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 PARP2Q9UGN5 583 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZNF536O15090 1300 aa8.11□□□□□ -1.11
CDC42BPA-208ENST00000442054 TDP2O95551 362 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 MMP3P08254 477 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 KLRC1P26715 233 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 STRN3Q13033 797 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 TTC16Q8NEE8 873 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 PSPC1Q8WXF1 523 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZSWIM4Q9H7M6 989 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 PAK6Q9NQU5 681 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 BTG3Q14201 252 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 CTTNQ14247 550 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 GRIK4Q16099 956 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 KANK3Q6NY19 840 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 MAMDC4Q6UXC1 1216 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 DESI2Q9BSY9 194 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 HOOK1Q9UJC3 728 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 GOLGA6L9A6NEM1 432 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 PES1O00541 588 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZSCAN12O43309 604 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 SERPINC1P01008 464 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 OR52Z1P0C646 297 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 SELPP16109 830 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 ATP2A2P16615 1042 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 QARSP47897 775 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 NLRP11P59045 1033 aaKnown RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 CCDC85BQ15834 202 aaPredicted RBP8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 TAF12Q16514 161 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 MEA1Q16626 185 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 PPP2R2DQ66LE6 453 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZNF365Q70YC5 407 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 LRRC71Q8N4P6 559 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 ADAMTSL1Q8N6G6 1762 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 SMARCE1Q969G3 411 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 DNAJC7Q99615 494 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 RWDD2AQ9UIY3 292 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 ADAMTS5Q9UNA0 930 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 Q9Y3F1 56 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 PCDHB7Q9Y5E2 793 aa8.1□□□□□ -1.11
CDC42BPA-208ENST00000442054 MEIS1O00470 390 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 CDK11BP21127 795 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 PMS1P54277 932 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 KRT31Q15323 416 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 SMYD4Q8IYR2 804 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 CYP2W1Q8TAV3 490 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 ARNTL2Q8WYA1 636 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 FAM20AQ96MK3 541 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 RNPEPQ9H4A4 650 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 COL20A1Q9P218 1284 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 L1RE1Q9UN81 338 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 MYADML2A6NDP7 307 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 RPLP2P05387 115 aaKnown RBP8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 SMIM10L2AP0DMW4 78 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 SMIM10L2BP0DMW5 78 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 PSMC5P62195 406 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 PPP2R3AQ06190 1150 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 COBLL1Q53SF7 1204 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 XKR3Q5GH77 459 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 EFCAB12Q6NXP0 572 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 NFRKBQ6P4R8 1299 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 LRRC8DQ7L1W4 858 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 DAGLBQ8NCG7 672 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 REPS2Q8NFH8 660 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 PPTC7Q8NI37 304 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 CAGE1Q8TC20 777 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 SENP7Q9BQF6 1050 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 ZMYND12Q9H0C1 365 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 ABHD10Q9NUJ1 306 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 PSD3Q9NYI0 1048 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 COLQQ9Y215 455 aaPredicted RBP8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 TRPM7Q96QT4 1865 aa8.09□□□□□ -1.11
CDC42BPA-208ENST00000442054 AKR1B15C9JRZ8 316 aaPredicted RBP8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 P4HBP07237 508 aaKnown RBP8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 TPM4P67936 248 aa8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 KIZQ2M2Z5 673 aa8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 STXBP4Q6ZWJ1 553 aa8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 THNSL1Q8IYQ7 743 aa8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 IQUBQ8NA54 791 aa8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 TRPV1Q8NER1 839 aa8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 TCP11Q8WWU5 503 aa8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 AAASQ9NRG9 546 aa8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 PIN4Q9Y237 131 aaKnown RBP8.09□□□□□ -1.12
CDC42BPA-208ENST00000442054 STK24Q9Y6E0 443 aa8.09□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms