RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 MTHFD1LQ6UB35 978 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CCDC186Q7Z3E2 898 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TPH2Q8IWU9 490 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 BBXQ8WY36 941 aaPredicted RBP16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 VWCEQ96DN2 955 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 FAM167AQ96KS9 214 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 GDF15Q99988 308 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 HSD3B7Q9H2F3 369 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 IMPACTQ9P2X3 320 aa16.08■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RANBP2P49792 3224 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RRN3P2A6NIE6 340 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MED24O75448 989 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SLITRK3O94933 977 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 C22orf31O95567 290 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 KRT18P05783 430 aaKnown RBP16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PLA2G4BP0C869 781 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ACRP10323 421 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 IDEP14735 1019 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 KLRC1P26715 233 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RPA1P27694 616 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PRCPP42785 496 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 FPGSQ05932 587 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 BFSP2Q13515 415 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MTERF2Q49AM1 385 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ZNF484Q5JVG2 852 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ZNF618Q5T7W0 954 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ANO5Q75V66 913 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 LRRC8DQ7L1W4 858 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TMC6Q7Z403 805 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ADSSL1Q8N142 457 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 KCTD17Q8N5Z5 321 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CAGE1Q8TC20 777 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 DNAJB3Q8WWF6 145 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 HSD17B14Q9BPX1 270 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 POLR3CQ9BUI4 534 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 OSBPL7Q9BZF2 842 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RRAGDQ9NQL2 400 aaPredicted RBP16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 COL1A2P08123 1366 aa16.07■□□□□ 0.16
TNFRSF1A-204ENST00000440083 BICDL2A1A5D9 508 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PITPNM1O00562 1244 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 IQCF3P0C7M6 154 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SPATA31C1P0DKV0 1188 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SELPP16109 830 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ZNF18P17022 549 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 NPEPPSP55786 919 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RBL2Q08999 1139 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TMEM62Q0P6H9 643 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MBTPS1Q14703 1052 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ECM1Q16610 540 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 FILIP1LQ4L180 1135 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 HSP90AA4PQ58FG1 418 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 XKR3Q5GH77 459 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 POTEGQ6S5H5 508 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 DYMQ7RTS9 669 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 KCNK18Q7Z418 384 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 FILIP1Q7Z7B0 1213 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 DEFB128Q7Z7B8 93 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 GPBP1Q86WP2 473 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CCDC65Q8IXS2 484 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CCDC155Q8N6L0 562 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 RETREG2Q8NC44 543 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 NOC3LQ8WTT2 800 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 DDX12PQ92771 950 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 DHTKD1Q96HY7 919 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CEP89Q96ST8 783 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 UBE2OQ9C0C9 1292 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PRO3102Q9H379 93 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TUFT1Q9NNX1 390 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SAMSN1Q9NSI8 373 aaKnown RBP16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 NRBP2Q9NSY0 501 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 DNM3Q9UQ16 869 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 COLQQ9Y215 455 aaPredicted RBP16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TET1Q8NFU7 2136 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 EVPLQ92817 2033 aa16.06■□□□□ 0.16
TNFRSF1A-204ENST00000440083 SIP14410 1827 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 E9PMD0 336 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 NRDCO43847 1150 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CLCN3P51790 818 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PSMD2Q13200 908 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 GPNMBQ14956 572 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TARBP2Q15633 366 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 C9orf50Q5SZB4 431 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 C16orf59Q7L2K0 433 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CATSPER3Q86XQ3 398 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 LRRC71Q8N4P6 559 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TMEM199Q8N511 208 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 CCDC150Q8NCX0 1101 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 NEK9Q8TD19 979 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ZNF830Q96NB3 372 aaPredicted RBP16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PPP1R16BQ96T49 567 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 NIFKQ9BYG3 293 aaKnown RBP16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ZSWIM4Q9H7M6 989 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 MAPK8IP1Q9UQF2 711 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PCDHA2Q9Y5H9 948 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 ARID2Q68CP9 1835 aa16.05■□□□□ 0.16
TNFRSF1A-204ENST00000440083 NBNO60934 754 aa16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 YWHABP31946 246 aaKnown RBP16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 PPIGQ13427 754 aaKnown RBP eCLIP16.04■□□□□ 0.168e-8■■■■□ 26.7
TNFRSF1A-204ENST00000440083 DRP2Q13474 957 aa16.04■□□□□ 0.16
TNFRSF1A-204ENST00000440083 TCTN1Q2MV58 587 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms