RNA–Protein interactions for RNA: ENST00000439724.7

SMAD3-202, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-202ENST00000439724 SYNGAP1Q96PV0 1343 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 IGKV6D-21A0A0A0MT36 114 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 ANO9A1A5B4 782 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 KRT13P13646 458 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 OSBPP22059 807 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 ANXA13P27216 316 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 PRKCIP41743 596 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 NPTX2P47972 431 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 JAM2P57087 298 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 WHAMMP3Q1A5X7 153 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 ERCC6LQ2NKX8 1250 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 INTS8Q75QN2 995 aaKnown RBP12.86□□□□□ -0.35
SMAD3-202ENST00000439724 MAP4K3Q8IVH8 894 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 PDCL2Q8N4E4 241 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 CEP112Q8N8E3 955 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 XXYLT1Q8NBI6 393 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 BSNDQ8WZ55 320 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 UBXN4Q92575 508 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 SPAG5Q96R06 1193 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 MPHOSPH6Q99547 160 aaKnown RBP12.86□□□□□ -0.35
SMAD3-202ENST00000439724 ATP6V0A4Q9HBG4 840 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 LUC7LQ9NQ29 371 aaKnown RBP12.86□□□□□ -0.35
SMAD3-202ENST00000439724 XPNPEP1Q9NQW7 623 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 CYP26B1Q9NR63 512 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 SEPT9Q9UHD8 586 aaPredicted RBP12.86□□□□□ -0.35
SMAD3-202ENST00000439724 TBX20Q9UMR3 447 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 TELO2Q9Y4R8 837 aa12.86□□□□□ -0.35
SMAD3-202ENST00000439724 BZW2Q9Y6E2 419 aaKnown RBP12.86□□□□□ -0.35
SMAD3-202ENST00000439724 UNCXA6NJT0 531 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 P4HA2O15460 535 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 N4BP1O75113 896 aaKnown RBP12.85□□□□□ -0.35
SMAD3-202ENST00000439724 TGFB3P10600 412 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 UBA1P22314 1058 aaKnown RBP12.85□□□□□ -0.35
SMAD3-202ENST00000439724 ABCD1P33897 745 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 MAGEA1P43355 309 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 MYL7Q01449 175 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 SP4Q02446 784 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 KLHL30Q0D2K2 578 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 SLC18A3Q16572 532 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 PAPD7Q5XG87 772 aaKnown RBP12.85□□□□□ -0.35
SMAD3-202ENST00000439724 GPAT2Q6NUI2 795 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 SEPT14Q6ZU15 432 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 RSRC2Q7L4I2 434 aaKnown RBP12.85□□□□□ -0.35
SMAD3-202ENST00000439724 CYFIP1Q7L576 1253 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 SRGAP1Q7Z6B7 1085 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 PNMA8AQ86V59 439 aaPredicted RBP12.85□□□□□ -0.35
SMAD3-202ENST00000439724 KCNN1Q92952 543 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 SECISBP2LQ93073 1101 aaKnown RBP12.85□□□□□ -0.35
SMAD3-202ENST00000439724 CBWD1Q9BRT8 395 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 PDCL3Q9H2J4 239 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 KMT5AQ9NQR1 393 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 ZNF302Q9NR11 478 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 HSPBP1Q9NZL4 362 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 RBPJLQ9UBG7 517 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 KCNG1Q9UIX4 513 aa12.85□□□□□ -0.35
SMAD3-202ENST00000439724 SIP14410 1827 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 DNAJC25-GNG10A0A024R161 153 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 CCDC169A6NNP5 214 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 TISP43B9A030 160 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 H0YCG3 227 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 FARP2O94887 1054 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-202ENST00000439724 OATP04181 439 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 TRIM49P0CI25 452 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 TRIM49CP0CI26 452 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 RFX1P22670 979 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 GFPT1Q06210 699 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-202ENST00000439724 NEDD9Q14511 834 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 CBWD6Q4V339 395 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 EAPPQ56P03 285 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-202ENST00000439724 CBWD3Q5JTY5 395 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 CBWD5Q5RIA9 395 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 IQCEQ6IPM2 695 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 TRMT1LQ7Z2T5 733 aaKnown RBP12.84□□□□□ -0.35
SMAD3-202ENST00000439724 TRAPPC11Q7Z392 1133 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 IRF2BP2Q7Z5L9 587 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 TRIM58Q8NG06 486 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 GTF3C2Q8WUA4 911 aaPredicted RBP12.84□□□□□ -0.35
SMAD3-202ENST00000439724 TXNRD2Q9NNW7 524 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 ATP8B3O60423 1300 aa12.84□□□□□ -0.35
SMAD3-202ENST00000439724 LOC102724159A0A0B4J2E5 919 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 MACROD2A1Z1Q3 448 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 DENND3A2RUS2 1198 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 PMM2O15305 246 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 TACC1O75410 805 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 ATP4AP20648 1035 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 SCP2P22307 547 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 GJA5P36382 358 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 VAMP7P51809 220 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 TUBB4BP68371 445 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 SNAPC2Q13487 334 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 PWP2Q15269 919 aaKnown RBP12.83□□□□□ -0.35
SMAD3-202ENST00000439724 GPIHBP1Q8IV16 184 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 FMNL3Q8IVF7 1028 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 SHCBP1Q8NEM2 672 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 ZNF526Q8TF50 670 aaPredicted RBP12.83□□□□□ -0.35
SMAD3-202ENST00000439724 RABGGTAQ92696 567 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 GOLGA1Q92805 767 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 FGD4Q96M96 766 aa12.83□□□□□ -0.35
SMAD3-202ENST00000439724 NIFKQ9BYG3 293 aaKnown RBP12.83□□□□□ -0.35
SMAD3-202ENST00000439724 INTS2Q9H0H0 1204 aaKnown RBP12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms