RNA–Protein interactions for RNA: ENST00000439697.1

GTF3C5-206, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 3

Gene GTF3C5, Length 823 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-206ENST00000439697 PPME1Q9Y570 386 aa12.86□□□□□ -0.35
GTF3C5-206ENST00000439697 MRPL42Q9Y6G3 142 aaKnown RBP12.86□□□□□ -0.35
GTF3C5-206ENST00000439697 NLRC5Q86WI3 1866 aa12.86□□□□□ -0.35
GTF3C5-206ENST00000439697 TMEM221A6NGB7 291 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 M0R296 226 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 DKC1O60832 514 aaKnown RBP eCLIP12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 SLITRK3O94933 977 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 LYPLA2O95372 231 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 HMGN5P82970 282 aaKnown RBP12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 CAMK1Q14012 370 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 TRIM29Q14134 588 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 CTC1Q2NKJ3 1217 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 PLA2G4FQ68DD2 849 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 TRIM67Q6ZTA4 783 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 ZNF579Q8NAF0 562 aaKnown RBP12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 P2RX5Q93086 422 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 LXNQ9BS40 222 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 C11orf84Q9BUA3 381 aaPredicted RBP12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 TMEM161AQ9NX61 479 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 RGL1Q9NZL6 768 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 DMDP11532 3685 aa12.85□□□□□ -0.35
GTF3C5-206ENST00000439697 DENND3A2RUS2 1198 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 NEMFO60524 1076 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 GFRA3O60609 400 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 BAG4O95429 457 aaKnown RBP12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 YWHABP31946 246 aaKnown RBP12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 GATMP50440 423 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 NPEPPSP55786 919 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 SMAD4Q13485 552 aaKnown RBP12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 RABEP1Q15276 862 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 CALCRLQ16602 461 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 NAALADL2Q58DX5 795 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 FAM102BQ5T8I3 360 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 ZNF410Q86VK4 478 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 C8orf76Q96K31 380 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 POP1Q99575 1024 aaKnown RBP12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 JPH2Q9BR39 696 aaPredicted RBP12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 TRAIPQ9BWF2 469 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 LMAN2LQ9H0V9 348 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 TMEM60Q9H2L4 133 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 FOXP1Q9H334 677 aaPredicted RBP12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 ZSWIM4Q9H7M6 989 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 RNF19AQ9NV58 838 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 PCDHA12Q9UN75 941 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 PCDHB7Q9Y5E2 793 aa12.84□□□□□ -0.35
GTF3C5-206ENST00000439697 ZBTB39O15060 712 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 DNM2P50570 870 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 FOSBP53539 338 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 VCPP55072 806 aaKnown RBP12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 GUCY1B3Q02153 619 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 ORC2Q13416 577 aaPredicted RBP12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 NCAPH2Q6IBW4 605 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 ZNF598Q86UK7 904 aaKnown RBP12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 NLRP7Q8WX94 980 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 DYDC2Q96IM9 177 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 ZNF668Q96K58 619 aaPredicted RBP12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 CEP170P1Q96L14 293 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 EIF2AK1Q9BQI3 630 aaKnown RBP12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 TTC12Q9H892 705 aaPredicted RBP12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 IFT122Q9HBG6 1241 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 ALG13Q9NP73 1137 aaKnown RBP12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 SUCLA2Q9P2R7 463 aaPredicted RBP12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 CD207Q9UJ71 328 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 PLAGL2Q9UPG8 496 aa12.83□□□□□ -0.36
GTF3C5-206ENST00000439697 FNDC1Q4ZHG4 1894 aaPredicted RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 ATG2AQ2TAZ0 1938 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 PTPRZ1P23471 2315 aaPredicted RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 A0A087WZ62 844 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 A0A0U1RQF3 1178 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 MARCH6O60337 910 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 CSDE1O75534 798 aaKnown RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 ATF7P17544 494 aaPredicted RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 U2AF2P26368 475 aaKnown RBP eCLIP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 RFC5P40937 340 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 ZXDAP98168 799 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 CYP4A11Q02928 519 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 CTTNQ14247 550 aaKnown RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 SAFBQ15424 915 aaKnown RBP eCLIP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 PAN2Q504Q3 1202 aaKnown RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 OTUD6AQ7L8S5 288 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 ECHDC2Q86YB7 292 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 RHPN2Q8IUC4 686 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 KSR1Q8IVT5 923 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 SUGP1Q8IWZ8 645 aaKnown RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 EXOC8Q8IYI6 725 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 SLC7A3Q8WY07 619 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 FDXACB1Q9BRP7 624 aaPredicted RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 GCOM2Q9BZD3 368 aaPredicted RBP12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 ATP6V0A4Q9HBG4 840 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 CHST12Q9NRB3 414 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 LRFN2Q9ULH4 789 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 KIAA1671Q9BY89 1806 aa12.82□□□□□ -0.36
GTF3C5-206ENST00000439697 GAS2O43903 313 aaKnown RBP12.81□□□□□ -0.36
GTF3C5-206ENST00000439697 CD2BP2O95400 341 aaKnown RBP12.81□□□□□ -0.36
GTF3C5-206ENST00000439697 ITGB1P05556 798 aa12.81□□□□□ -0.36
GTF3C5-206ENST00000439697 SPATA31C1P0DKV0 1188 aa12.81□□□□□ -0.36
GTF3C5-206ENST00000439697 FGFR1P11362 822 aa12.81□□□□□ -0.36
GTF3C5-206ENST00000439697 ZSCAN20P17040 1043 aaPredicted RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms