RNA–Protein interactions for RNA: ENST00000439600.2

LMO3-207, Transcript of LIM domain only 3, humanhuman

TSL 2

Gene LMO3, Length 1,044 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-207ENST00000439600 WDR44Q5JSH3 913 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 ABHD15Q6UXT9 468 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 CCDC73Q6ZRK6 1079 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 OTUD6AQ7L8S5 288 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 PLPPR4Q7Z2D5 763 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 RNF180Q86T96 592 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 TLK2Q86UE8 772 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 CABP7Q86V35 215 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 ALDH16A1Q8IZ83 802 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 TRPV1Q8NER1 839 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 MRPS27Q92552 414 aaKnown RBP12.12□□□□□ -0.47
LMO3-207ENST00000439600 INSM2Q96T92 566 aaPredicted RBP12.12□□□□□ -0.47
LMO3-207ENST00000439600 GPR20Q99678 358 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 HSD17B14Q9BPX1 270 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 EIF2AK1Q9BQI3 630 aaKnown RBP12.12□□□□□ -0.47
LMO3-207ENST00000439600 SAP130Q9H0E3 1048 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 ZSWIM4Q9H7M6 989 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 XPNPEP3Q9NQH7 507 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 NRBP2Q9NSY0 501 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 USP25Q9UHP3 1055 aa12.12□□□□□ -0.47
LMO3-207ENST00000439600 SUPT20HL2P0C7V6 817 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 CCND3P30281 292 aaPredicted RBP12.11□□□□□ -0.47
LMO3-207ENST00000439600 MCM4P33991 863 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 TCF7P36402 384 aaPredicted RBP12.11□□□□□ -0.47
LMO3-207ENST00000439600 STAT5BP51692 787 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 SKOR2Q2VWA4 1001 aaPredicted RBP12.11□□□□□ -0.47
LMO3-207ENST00000439600 HSDL1Q3SXM5 330 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 RESP18Q5W5W9 173 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 SWSAP1Q6NVH7 229 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 EXOC8Q8IYI6 725 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 IQUBQ8NA54 791 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 SNX29Q8TEQ0 813 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 SH3TC2Q8TF17 1288 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 AFG1LQ8WV93 481 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 GLG1Q92896 1179 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 GJA10Q969M2 543 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 ARMC5Q96C12 935 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 CLIC6Q96NY7 704 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 NACC1Q96RE7 527 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 LRRC27Q9C0I9 530 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.11□□□□□ -0.47
LMO3-207ENST00000439600 RNF208Q9H0X6 261 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 UPF3AQ9H1J1 476 aaKnown RBP12.11□□□□□ -0.47
LMO3-207ENST00000439600 CUEDC2Q9H467 287 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 ZNF302Q9NR11 478 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 ZNF215Q9UL58 517 aaPredicted RBP12.11□□□□□ -0.47
LMO3-207ENST00000439600 DNM3Q9UQ16 869 aa12.11□□□□□ -0.47
LMO3-207ENST00000439600 IGKV6D-21A0A0A0MT36 114 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 FAM237AA0A1B0GTK4 181 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 GSTTP1A0A1W2PQM5 241 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 TNFRSF10BO14763 440 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 CABYRO75952 493 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 SLITRK3O94933 977 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 LYPLA2O95372 231 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 MBD3O95983 291 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 CCNE2O96020 404 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 C6orf222P0C671 652 aaPredicted RBP12.1□□□□□ -0.47
LMO3-207ENST00000439600 BRD2P25440 801 aaKnown RBP12.1□□□□□ -0.47
LMO3-207ENST00000439600 AMPD3Q01432 767 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 SP4Q02446 784 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 FSCN1Q16658 493 aaKnown RBP12.1□□□□□ -0.47
LMO3-207ENST00000439600 CTC1Q2NKJ3 1217 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 HYIQ5T013 277 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 RRAGBQ5VZM2 374 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 KANK3Q6NY19 840 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 SHC4Q6S5L8 630 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 TPH2Q8IWU9 490 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 C4orf19Q8IY42 314 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 AFAP1L1Q8TED9 768 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 COPS5Q92905 334 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 FAM167AQ96KS9 214 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 UIMC1Q96RL1 719 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 KATNAL1Q9BW62 490 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 SEZ6LQ9BYH1 1024 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 POLMQ9NP87 494 aaPredicted RBP12.1□□□□□ -0.47
LMO3-207ENST00000439600 ERAP1Q9NZ08 941 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 GABBR1Q9UBS5 961 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 HOOK1Q9UJC3 728 aaKnown RBP12.1□□□□□ -0.47
LMO3-207ENST00000439600 KCNH3Q9ULD8 1083 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 PPME1Q9Y570 386 aa12.1□□□□□ -0.47
LMO3-207ENST00000439600 GPC6Q9Y625 555 aaPredicted RBP12.1□□□□□ -0.47
LMO3-207ENST00000439600 MMP3P08254 477 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 HOXD8P13378 290 aaPredicted RBP12.09□□□□□ -0.47
LMO3-207ENST00000439600 CCL5P13501 91 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 CST5P28325 142 aaPredicted RBP12.09□□□□□ -0.47
LMO3-207ENST00000439600 SYKP43405 635 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 SOX10P56693 466 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 HIF1AQ16665 826 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 C11orf91Q3C1V1 193 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 XKR3Q5GH77 459 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 SPECC1Q5M775 1068 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 MRPL14Q6P1L8 145 aaKnown RBP12.09□□□□□ -0.47
LMO3-207ENST00000439600 CATSPER3Q86XQ3 398 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 CKAP2LQ8IYA6 745 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 FSIP1Q8NA03 581 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 DYDC2Q96IM9 177 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 EPSTI1Q96J88 318 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 ZNF333Q96JL9 665 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 CHAMP1Q96JM3 812 aa12.09□□□□□ -0.47
LMO3-207ENST00000439600 CITED4Q96RK1 184 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms