RNA–Protein interactions for RNA: ENST00000439555.2

IRF1-204, Transcript of interferon regulatory factor 1, humanhuman

TSL 5

Gene IRF1, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-204ENST00000439555 PPME1Q9Y570 386 aa12.89□□□□□ -0.35
IRF1-204ENST00000439555 SLC37A4O43826 429 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 ZSCAN20P17040 1043 aaPredicted RBP12.88□□□□□ -0.35
IRF1-204ENST00000439555 NBL1P41271 181 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 GPC3P51654 580 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 VCPP55072 806 aaKnown RBP12.88□□□□□ -0.35
IRF1-204ENST00000439555 UBE3AQ05086 875 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 LRRC71Q8N4P6 559 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 SPPL3Q8TCT6 385 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 RSPH1Q8WYR4 309 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 GTF3C6Q969F1 213 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 GJA10Q969M2 543 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 RIPOR3Q96MK2 946 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 ATP6V0A4Q9HBG4 840 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 VAV3Q9UKW4 847 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 FNDC1Q4ZHG4 1894 aaPredicted RBP12.88□□□□□ -0.35
IRF1-204ENST00000439555 RIF1Q5UIP0 2472 aaKnown RBP12.88□□□□□ -0.35
IRF1-204ENST00000439555 VPS13AQ96RL7 3174 aa12.88□□□□□ -0.35
IRF1-204ENST00000439555 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
IRF1-204ENST00000439555 MAFO75444 373 aaPredicted RBP12.87□□□□□ -0.35
IRF1-204ENST00000439555 EOMESO95936 686 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 ITGB1P05556 798 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 P4HBP07237 508 aaKnown RBP12.87□□□□□ -0.35
IRF1-204ENST00000439555 FDPSP14324 419 aaKnown RBP12.87□□□□□ -0.35
IRF1-204ENST00000439555 QARSP47897 775 aaKnown RBP12.87□□□□□ -0.35
IRF1-204ENST00000439555 ME3Q16798 604 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 PIK3AP1Q6ZUJ8 805 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 ZNF410Q86VK4 478 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 SLFN12Q8IYM2 578 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 KLHL23Q8NBE8 558 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 SUSD6Q92537 303 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 TRAIPQ9BWF2 469 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 GCOM2Q9BZD3 368 aaPredicted RBP12.87□□□□□ -0.35
IRF1-204ENST00000439555 INO80BQ9C086 356 aaPredicted RBP12.87□□□□□ -0.35
IRF1-204ENST00000439555 TMEM117Q9H0C3 514 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 BRMS1Q9HCU9 246 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 CHST12Q9NRB3 414 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 FAM86C1Q9NVL1 165 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 SEPT9Q9UHD8 586 aaPredicted RBP12.87□□□□□ -0.35
IRF1-204ENST00000439555 PCDHB12Q9Y5F1 795 aa12.87□□□□□ -0.35
IRF1-204ENST00000439555 A0A0U1RQF3 1178 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 PRR23AA6NEV1 266 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 TBKBP1A7MCY6 615 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 EML1O00423 815 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 CCNT1O60563 726 aaKnown RBP12.86□□□□□ -0.35
IRF1-204ENST00000439555 KRT2P35908 639 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 NEK4P51957 841 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 EPHA7Q15375 998 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 PTPN21Q16825 1174 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 MTERF2Q49AM1 385 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 PAN2Q504Q3 1202 aaKnown RBP12.86□□□□□ -0.35
IRF1-204ENST00000439555 FAM102BQ5T8I3 360 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 PDE12Q6L8Q7 609 aaKnown RBP12.86□□□□□ -0.35
IRF1-204ENST00000439555 ANO5Q75V66 913 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 ECHDC2Q86YB7 292 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 C4orf19Q8IY42 314 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 OXER1Q8TDS5 423 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 HAS1Q92839 578 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 TNFRSF25Q93038 417 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 PPP1R16BQ96T49 567 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 GJB4Q9NTQ9 266 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 DACT1Q9NYF0 836 aa12.86□□□□□ -0.35
IRF1-204ENST00000439555 USP15Q9Y4E8 981 aaPredicted RBP12.86□□□□□ -0.35
IRF1-204ENST00000439555 H0Y858 1186 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 GAS2O43903 313 aaKnown RBP12.85□□□□□ -0.35
IRF1-204ENST00000439555 BAG4O95429 457 aaKnown RBP12.85□□□□□ -0.35
IRF1-204ENST00000439555 LAG3P18627 525 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 GATMP50440 423 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 TMEM184AQ6ZMB5 413 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 OTUD6AQ7L8S5 288 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 ASCL5Q7RTU5 278 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 NECAB1Q8N987 351 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 NSUN7Q8NE18 718 aaKnown RBP12.85□□□□□ -0.35
IRF1-204ENST00000439555 POF1BQ8WVV4 589 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 NLRP7Q8WX94 980 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 SLC7A3Q8WY07 619 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 CDCA3Q99618 268 aaPredicted RBP12.85□□□□□ -0.35
IRF1-204ENST00000439555 CYP26B1Q9NR63 512 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 TLR9Q9NR96 1032 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 TYW1Q9NV66 732 aaKnown RBP12.85□□□□□ -0.35
IRF1-204ENST00000439555 SUCLA2Q9P2R7 463 aaPredicted RBP12.85□□□□□ -0.35
IRF1-204ENST00000439555 LZTS1Q9Y250 596 aa12.85□□□□□ -0.35
IRF1-204ENST00000439555 CARNS1A5YM72 827 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 MARCH6O60337 910 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 GLP2RO95838 553 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 FGFR1P11362 822 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 SKIP12755 728 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 SFPQP23246 707 aaKnown RBP eCLIP12.84□□□□□ -0.35
IRF1-204ENST00000439555 DNAJB1P25685 340 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 RFC5P40937 340 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 ID4P47928 161 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 PLCB3Q01970 1234 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 SPIRE1Q08AE8 756 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 NR5A1Q13285 461 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 DRP2Q13474 957 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 ADGRD2Q7Z7M1 963 aa12.84□□□□□ -0.35
IRF1-204ENST00000439555 ZNF598Q86UK7 904 aaKnown RBP12.84□□□□□ -0.35
IRF1-204ENST00000439555 UBALD2Q8IYN6 164 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms